PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_23545
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 131aa    MW: 14850.9 Da    PI: 6.3402
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_23545genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.21.1e-0766110347
        FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 
                 Y++YA+++GF+v+k++     +++ i+ ++f C k g++++ +++
  PEQU_23545  66 YCAYAHHIGFTVQKDHVGFWPNSKIIKIKDFICGKAGFKKDLNNN 110
                 99******************9******************998877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.6E-566116IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MDFSVDQEIL MESQNDCEND ANQLGLLAAA GSIPQVPKPL TVCIDPIADI LLRVVVHNEK  60
EVYENYCAYA HHIGFTVQKD HVGFWPNSKI IKIKDFICGK AGFKKDLNNN VAVKYRRGDK  120
DWLSSHDSIY R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020597010.11e-64protein FAR1-RELATED SEQUENCE 5-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587