PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_23357
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 141aa    MW: 15870.1 Da    PI: 9.5176
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_23357genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR144.45.6e-146643190
        FAR1 31 rtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                 +fvC k g+++e + + ++ + +raet tgC a+++ + +k+g+w v+kl + HnH+la
  PEQU_23357  6 PNFVCGKAGFKKELEIT-KTVKYKRAETTTGCPAMIRYEVDKEGNWGVKKLIESHNHSLA 64
                58***********9988.89999***********************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.9E-12664IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
MKYIVPNFVC GKAGFKKELE ITKTVKYKRA ETTTGCPAMI RYEVDKEGNW GVKKLIESHN  60
HSLANPGDKH LLHSSRKISE VNADVLRSMT QSGIRPKDTF NFLAQEVGGV ENLECTKADA  120
FNFIQREKRS RIENGDANAL L
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020571315.11e-102uncharacterized protein LOC110018364
TrEMBLA0A2I0VS863e-46A0A2I0VS86_9ASPA; Protein FAR1-RELATED SEQUENCE 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-17FAR1-related sequence 5