PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_23142

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bZIP

Protein Properties

Length: 290aa MW: 33657.5 Da PI: 6.94

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_23142	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.2	1.2e-10	3	30	7	34
HHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeek 34 rr+++NReAAr+sR+RKka++++Le PEQU_23142 3 LRRLAQNREAARKSRLRKKAYVQQLESS 30 69***********************974 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50217	8.623	1	43	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.5E-7	3	34	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.88E-7	3	43	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.4E-8	4	44	No hit	No description
PROSITE pattern	PS00036	0	4	19	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.9E-28	87	162	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0042742	Biological Process	defense response to bacterium
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence Send to blast
QVLRRLAQNR EAARKSRLRK KAYVQQLESS RIKLAQVEQE LETTKQQELL QVPYDRADLY 60 LQETSWRRGV AAFEMEYGHW VEEQNRQICE LRAVLQTHVS EIELRMLVES GMNHYYDLFR 120 IKAIAAKSDV FYLMSGLWRT ASERFFLWIG GFRPSELLKV LTPQFDPLTE QQVVAVCNLQ 180 QSSQQAEDAL SQGLDKLQQT LAEILTREPL GSSGTENYME NYMGQMANAM GQLDALIGFV 240 NQADHLRQQT MQQMYKILTT RQVARGLLAL GDYFQRLRAL SLLWEARPCE

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00586	DAP	Transfer from AT5G65210	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020577095.1	0.0	transcription factor TGA1-like
Refseq	XP_020577096.1	0.0	transcription factor TGA1-like
Refseq	XP_020577097.1	0.0	transcription factor TGA1-like
Swissprot	Q39237	1e-129	TGA1_ARATH; Transcription factor TGA1
TrEMBL	A0A2I0WFA8	1e-172	A0A2I0WFA8_9ASPA; Transcription factor TGA1
STRING	XP_008801018.1	1e-157	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3571	38	77

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65210.6	1e-125	bZIP family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Herrera-Vásquez A, et al. Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis. Plant Mol. Biol. Rep., 2018. [PMID:26696694] Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Sun T, et al. TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g). New Phytol., 2018. 217(1): p. 344-354 [PMID:28898429]