PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_21971
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 213aa    MW: 24749.8 Da    PI: 7.0025
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_21971genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR160.64.7e-1957144290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  Y++YA+ vGF+ rk+++++  + ++i+++++ C k+ ++++++ + ++ + ++a trtgC+a+++   + dg+w ++k+++ HnH+la
  PEQU_21971  57 HYCAYAHYVGFTERKDHTTYWAKFKKIKSKDYICGKSRHKRKSQLA-TTVKYRKADTRTGCQAMVHYAIDLDGNWTIEKFVESHNHPLA 144
                 6***************************************999999.8888999*********************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.0E-1657144IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MMELDFSLNE EFEHMDDEMN VNVFETEISR AETDCNDPIA RSFLNIVVRN EEEAYKHYCA  60
YAHYVGFTER KDHTTYWAKF KKIKSKDYIC GKSRHKRKSQ LATTVKYRKA DTRTGCQAMV  120
HYAIDLDGNW TIEKFVESHN HPLAESGDKH LLGSSRKISE LNANLLRSMT DSGIRAVDAF  180
NFLATEVGGV ENLKCTRQDA YNFIQRDKRS RIE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020587208.11e-160protein FAR1-RELATED SEQUENCE 5-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-15FAR1-related sequence 5