PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

PEQU_21566

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

MYB_related

Protein Properties

Length: 265aa MW: 30666.2 Da PI: 9.5355

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_21566	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.3	4.2e-09	169	197	2	30
SSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIart 30 +WT+eE+ l+ avk++G g+W I ++ PEQU_21566 169 HPWTAEEENDLIAAVKKHGEGNWLNILKE 197 69*********************999875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	15.602	162	220	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.2E-13	164	220	IPR009057	Homeodomain-like
SuperFamily	SSF46689	8.61E-13	166	223	IPR009057	Homeodomain-like
SMART	SM00717	6.7E-10	167	218	IPR001005	SANT/Myb domain
CDD	cd11660	5.84E-12	169	217	No hit	No description
Pfam	PF13921	5.3E-7	171	223	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence Send to blast
MVDKGKRPLQ IQLKRPQQTC QCLQKHTQQP SQHVVNKLPF TIRERLNKEY SFKKEAVEQI 60 FRDLVKKPEF KLPELKKPDE IDKRDHPQYY PCRRLEDDSD LEFELEAVPP VSAEALLQAI 120 ECFEVIMASG MTPKAHLSDV HISKASHSKE QALTPDYSET LRPRKRKRHP WTAEEENDLI 180 AAVKKHGEGN WLNILKEDFK YDRNPSQLSQ RWNIIKKRLA SSNCASDDKM NSWVMQNKQL 240 ATRKAISMAL NIPMIGSLST PQAGN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020588578.1	1e-120	telomere repeat-binding factor 4-like isoform X1
Refseq	XP_020588579.1	1e-121	uncharacterized protein LOC110030282 isoform X2
TrEMBL	A0A2I0X6W0	4e-70	A0A2I0X6W0_9ASPA; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4684	37	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58220.1	1e-20	MYB_related family protein