PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_21542
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 146aa    MW: 16825.6 Da    PI: 10.476
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_21542genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR143.21.3e-132603190
        FAR1 31 rtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                ++fvC k g+++e k + ++ + +rae rtgC a+++ + +k+ +w v+kl + HnH+la
  PEQU_21542  2 NDFVCGKAGFKKELKIT-KTVKYKRAEIRTGCPAMIRYEVDKECNWAVKKLIESHNHSLA 60
                58***********9988.89999***********************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.6E-11260IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
MNDFVCGKAG FKKELKITKT VKYKRAEIRT GCPAMIRYEV DKECNWAVKK LIESHNHSLA  60
NPGDKHLLRL SRKISEVNAD VLRTMTQSGI RSKDACAHSL RVLNFLHIKK IPNIYLLLRW  120
SENAKRDVYN SSRCMHLQQS QASNNI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020571315.12e-53uncharacterized protein LOC110018364
TrEMBLA0A2I0X8467e-28A0A2I0X846_9ASPA; Protein FAR1-RELATED SEQUENCE 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-09FAR1-related sequence 5