PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_21024
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 288aa    MW: 33917.8 Da    PI: 6.2004
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_21024genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix70.82.6e-22299186
    trihelix  1 rWtkqevlaLiearr...........emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86
                +Wt+++v++L++++            e   r r+  +kk++W++vsk m+e+g+ +sp+qC++k+++lnkryk+++e+ +++ t+ ++++ +++++++
  PEQU_21024  2 KWTDEMVRLLVTVVAfindegtpdpvEAAARRRSILQKKGKWKAVSKLMKEKGCFVSPQQCEDKFNDLNKRYKRLNEILGRGtTCMVVENPALLESMT 99
                7**************666666666433333333345**********************************************7799999999999996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.0E-182125No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MKWTDEMVRL LVTVVAFIND EGTPDPVEAA ARRRSILQKK GKWKAVSKLM KEKGCFVSPQ  60
QCEDKFNDLN KRYKRLNEIL GRGTTCMVVE NPALLESMTY VSAKMKEDVK KILSSKHLFY  120
REMCAYHNGQ TIPDSHIFGL KSEILACSGI LPEVGQDSED GDDDDEKSEE YGQLDIEEFL  180
AEIDLVFQDN NRTASEKLDW FQRRALQIKQ ERLVILSDAL ELKKRNFKWQ RFRSKKDREM  240
EKMRLENERL MKENERMILE LRQKELEFTS WRSREASDPA AYRMDMEH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020588093.10.0uncharacterized protein LOC110029937
TrEMBLA0A2I0VYR11e-170A0A2I0VYR1_9ASPA; Uncharacterized protein
STRINGXP_010246931.13e-98(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1947058
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10040.13e-59sequence-specific DNA binding transcription factors