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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_20967 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | YABBY | ||||||||
Protein Properties | Length: 132aa MW: 14605.1 Da PI: 8.5733 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 61.5 | 3.6e-19 | 2 | 62 | 2 | 62 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaesh 62 d s s+++Cyv+C++C+t+lav vP + + +vtv+CGhC sl +n + q+l + ++ PEQU_20967 2 DFGSPSDHLCYVRCAYCTTVLAVGVPCKRMTDTVTVKCGHCNSLSFLNPKPPFQTLCSDHQ 62 566889*************************************998888777777766554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04690 | 2.1E-19 | 6 | 63 | IPR006780 | YABBY protein |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0007275 | Biological Process | multicellular organism development |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence Send to blast |
MDFGSPSDHL CYVRCAYCTT VLAVGVPCKR MTDTVTVKCG HCNSLSFLNP KPPFQTLCSD 60 HQQTLLQVRI SPLPTSLYNV INWAKCDPRA LFYSATTASG ARRPATTAIQ LVYKIIEITN 120 LLASYLISLL LF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020583837.1 | 2e-44 | protein DROOPING LEAF-like | ||||
TrEMBL | A0A1W5ZNL4 | 2e-40 | A0A1W5ZNL4_9ASPA; Drooping leaf | ||||
TrEMBL | A0A2I0XDQ4 | 2e-40 | A0A2I0XDQ4_9ASPA; Protein DROOPING LEAF | ||||
STRING | VIT_01s0011g00140.t01 | 5e-26 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5951 | 36 | 57 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 3e-20 | YABBY family protein |