 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PEQU_20117 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
|
| Family |
CO-like |
| Protein Properties |
Length: 262aa MW: 29606.4 Da PI: 4.8688 |
| Description |
CO-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PEQU_20117 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-B_box | 24.8 | 4.4e-08 | 1 | 42 | 6 | 41 |
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
C+ +++ + +l+C+++ +lC +C +++H+ H +vp
PEQU_20117 1 CDSCHSLPPSLYCRSDAAYLCINCDSTIHSAnslarrHHRVP 42
******99*********************6688999977776 PP
|
| 2 | CCT | 70.2 | 5.3e-24 | 195 | 238 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
Rea++lRY+eK+ktRkF+K irY+sRKa+Ae+RpR+KGrFvk++
PEQU_20117 195 REARVLRYREKKKTRKFQKVIRYASRKAYAETRPRIKGRFVKRT 238
9*****************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 262 aa
Download sequence Send
to blast |
CDSCHSLPPS LYCRSDAAYL CINCDSTIHS ANSLARRHHR VPLLPIPSGG LIAGGISVAQ 60
PKEDEEEEEK EEEEEEEKVG FFLGGEVDEY FDLVEFSTCC EEEGREKYEG REEEDKRMLQ 120
SFQMGYEGIN KGIDCSSSIG HTVSFLILFE FPLVLKITFP NSATVVFHTG LSSIEATVVA 180
EDTIQIPQQL SSMDREARVL RYREKKKTRK FQKVIRYASR KAYAETRPRI KGRFVKRTDA 240
ELEVDQMFAA SHVMVEAGFG VV
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | FJ810423 | 0.0 | FJ810423.1 Phalaenopsis amabilis CONSTANS-like 1 mRNA, partial cds. |
