PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

PEQU_19165

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bHLH

Protein Properties

Length: 252aa MW: 28025.8 Da PI: 9.6676

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_19165	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.8	1.3e-10	64	110	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+h+ +E+rRR+riN +++Lr + P++ K++Ka+ L +++e +++L PEQU_19165 64 RTHSLAEKRRRERINAHLATLRHMTPNS-----SKMDKASLLARVIEQVRDL 110 68***********************8.....7**********988877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	15.262	61	110	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	5.63E-12	64	113	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	4.0E-8	64	110	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	3.1E-12	64	116	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.83E-9	64	112	No hit	No description
SMART	SM00353	6.5E-10	67	116	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:3.30.70.260	1.1E-4	152	201	No hit	No description
CDD	cd04873	1.07E-6	157	221	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence Send to blast
MKKSYNFSEE SKRADQSSSP YNGALLLPMA SSISAPALLS QNRDFPPSSS SSFSTDARTV 60 AALRTHSLAE KRRRERINAH LATLRHMTPN SSKMDKASLL ARVIEQVRDL NRNAANINKI 120 SAIPSEMNRV TVECISGGLI RSPFSSCADE NRHIKATLCC NDRPDLFSDL MRAFHILRLT 180 AIRAELTSVG GRAQNVFTLC RNDGSENVCM SSLMESIRNV LNEIASSEDS AFVDRSEKRQ 240 RFLATNYFNM TV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020583199.1	0.0	transcription factor bHLH30-like
TrEMBL	A0A2I0WVD7	1e-127	A0A2I0WVD7_9ASPA; Transcription factor bHLH51
STRING	XP_008805006.1	6e-66	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3347	36	78

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40200.1	3e-33	bHLH family protein