PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_18949
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family G2-like
Protein Properties Length: 310aa    MW: 33445.6 Da    PI: 6.564
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_18949genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.71.8e-3092145155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  PEQU_18949  92 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 145
                 59*******************.********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.96E-2089149IPR009057Homeodomain-like
PROSITE profilePS5129411.05989148IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.2E-3091150IPR009057Homeodomain-like
TIGRFAMsTIGR015573.3E-2493145IPR006447Myb domain, plants
PfamPF002491.2E-795144IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MREEEEPNWF SRWEEELPRP EELMPLSQSL ITSDLALAFD IPTQNPNPIP GLHIHHGSTG  60
NQHSASPPLP ADLESPDHSA PAGDDSARTL KRPRLVWTPQ LHKRFVDAVA HLGIKNAVPK  120
TIMQLMSVDG LTRENVASHL QKYRLYLKRM QGLSSSAGGP PVPMSAADAA TEQLFASNPI  180
PHPLLGRGGS SGLGQESFMQ FMAPPLLQHH QQMVAAAAAQ QQYYHQRQMG HFGSPGTGGG  240
GGGGGVYDHG FITRGALPPQ GLHRMGTPGF NMVRPSVPAA SNCFDDDDDV DSRVGGGRRV  300
LTLFPNCGED
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5lxu_A5e-3392148157Transcription factor LUX
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that acts as a negative regulator of freezing tolerance via a CBF-independent pathway. {ECO:0000269|PubMed:20331973}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought, salt and abscisic acid (ABA). Down-regulated by cold. {ECO:0000269|PubMed:20331973}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020577085.10.0transcription factor PCL1-like
SwissprotO222101e-49MYBC1_ARATH; Transcription factor MYBC1
TrEMBLA0A2I0XBE50.0A0A2I0XBE5_9ASPA; Two-component response regulator ARR1
STRINGGSMUA_Achr8P05880_0011e-99(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP162034105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.12e-53G2-like family protein
Publications ? help Back to Top
  1. Sardesai N,Laluk K,Mengiste T,Gelvin S
    The Arabidopsis Myb transcription factor MTF1 is a unidirectional regulator of susceptibility to Agrobacterium.
    Plant Signal Behav, 2018.
    [PMID:24785741]