PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_17373
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB_related
Protein Properties Length: 393aa    MW: 42784.9 Da    PI: 4.5839
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_17373genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.52.6e-12339385346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 
                      rWT  E+  l++av+++G+g+Wk+I  +     kgRt+ ++k++w++
       PEQU_17373 339 RWTLLEENTLKEAVAEHGTGNWKLILFCNAeifKGRTEVDLKDKWRN 385
                      9************************99999999*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.368334391IPR017930Myb domain
SuperFamilySSF466891.95E-13335388IPR009057Homeodomain-like
SMARTSM007176.5E-7336389IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.5E-11337388IPR009057Homeodomain-like
CDDcd116603.71E-16338388No hitNo description
PfamPF002491.4E-9339385IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009901Biological Processanther dehiscence
GO:0010152Biological Processpollen maturation
GO:0043067Biological Processregulation of programmed cell death
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MEEMGPSFLE IAAAEVKENR MDSSGSACQA GEVKDADQCI EKLEAKGKSS VDDGIGEKCE  60
GLGDVCMRGL EDNDVLKASK VVEVVSTENL EDDRIREESR GLCNASTEGD GCYGAEGFAL  120
EPMVDADKEE RVKLGGHGMS SPVGGLLHKL DPSEVSKVKE ASENSHLDPH MLVEETPPDA  180
EIAAAAALIS ISSGDEILNE PAKRSSTSNT ILPDSLTELV AEVTAGLDSS TGAPVKEKCS  240
LVPLPDIVNG DPSDLKGNGI VEECNKDAEP SKHKYILDHH AFFERNPTSY TSELSDDSQP  300
PHELSCLKST NLSTKRKTRK VSPPRMDDRG LVKRRAIKRW TLLEENTLKE AVAEHGTGNW  360
KLILFCNAEI FKGRTEVDLK DKWRNMSRYF LQA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020573287.10.0uncharacterized protein LOC110019797 isoform X1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31543040
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49850.12e-10telomere repeat binding factor 3