PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_17228
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB
Protein Properties Length: 651aa    MW: 74559 Da    PI: 7.5434
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_17228genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.95.4e-09474515240
                      SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 
                      ++W +eE ell ++v+++++g   +W+ I++++g+gR+ +++
       PEQU_17228 474 KPWDKEELELLRKGVQKYPKGtsrRWEVISEYIGTGRSVEEI 515
                      69***********************************99876 PP
2Myb_DNA-binding27.38.4e-09594638345
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 
                       W+   +  l++a k ++++   +W+++a  ++ g+t +qck ++ 
       PEQU_17228 594 TWSSTQERALIQALKTFPKEtgqRWERVATAVP-GKTVNQCKKKFA 638
                      7*****************99*************.********9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.287.1102.8E-20103207IPR001623DnaJ domain
SuperFamilySSF465656.67E-19105212IPR001623DnaJ domain
SMARTSM002715.4E-13106181IPR001623DnaJ domain
PROSITE profilePS5007618.014107189IPR001623DnaJ domain
CDDcd062572.64E-12107178IPR001623DnaJ domain
PfamPF002261.5E-17107186IPR001623DnaJ domain
PRINTSPR006257.2E-7130145IPR001623DnaJ domain
PRINTSPR006257.2E-7161181IPR001623DnaJ domain
PROSITE patternPS006360166185IPR018253DnaJ domain, conserved site
PROSITE profilePS500906.377468523IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.609.4E-6470515IPR009057Homeodomain-like
SuperFamilySSF466898.97E-8471517IPR009057Homeodomain-like
SMARTSM007172.1E-7472525IPR001005SANT/Myb domain
PfamPF002491.2E-7474515IPR001005SANT/Myb domain
CDDcd001671.25E-5475515No hitNo description
PROSITE profilePS512939.224590645IPR017884SANT domain
SMARTSM007171.2E-8591643IPR001005SANT/Myb domain
SuperFamilySSF466892.54E-9593646IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-6594640IPR009057Homeodomain-like
PfamPF002491.3E-7594639IPR001005SANT/Myb domain
CDDcd001676.72E-6594641No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 651 aa     Download sequence    Send to blast
MVSSTFFIMN GMKNPPLITY SEELRDGEPM ISSSNCLPVK ALKYEPAGHA FHSAALKLLG  60
YYEEDETDTD EQSVLSDDRN QSYMPSSDFY SNKAKKKKSG SGDKQQDHYA LLGLGHLRFL  120
ATEEQIRKCY RETALKYHPD KQAALLLAEE TDAAKQAKKD EIENHFKSVQ EAYEILIDPI  180
KRRIYDSTDE FDDEIPTECE PQDFFKVFGL AFLRNARWSV IQPVPSLGEE KTVMAEVDSF  240
YNFWYGFKSW REFPHADEFD LEQAESRDHK RWMERQNAKL REKAKKEEYG RIRALVDNAY  300
KRDPRILRRK EEEKIEKQRK KEAKLLARKL QEEEAARAAE EERRWKEEEE KRAAEAALNQ  360
KKQKEKEKKL LRKERNRLRG LSSTLVSKSL LNLSEENVES LCLSLEMDQI RNLCDSLERK  420
EGVERAHLLN SALSKANADA AQPDRKYDQT NGSSVHDAGE IKPGSILCSE KKEKPWDKEE  480
LELLRKGVQK YPKGTSRRWE VISEYIGTGR SVEEILKATK TVLLQKPNSA NSFGTFLEKR  540
KPAPSISSPL TTRLESEGLP VDVAGEPSAK ETNLDEPARE SPVSNGASSG MEDTWSSTQE  600
RALIQALKTF PKETGQRWER VATAVPGKTV NQCKKKFASM KESFRSKKGA D
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5dje_A1e-1819630613123Zuotin
5dje_B1e-1819630613123Zuotin
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020583375.10.0dnaJ homolog subfamily C member 2-like
TrEMBLA0A2I0X4K60.0A0A2I0X4K6_9ASPA; Chaperone protein dnaJ 72
STRINGXP_010067661.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP81193440
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11450.11e-117DnaJ domain ;Myb-like DNA-binding domain