PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_16016

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bZIP

Protein Properties

Length: 324aa MW: 36183.8 Da PI: 9.656

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_16016	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.7	3.3e-15	259	301	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eNk+Lkk PEQU_16016 259 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENKRLKK 301 79**************************************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.9E-8	255	306	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.381	257	301	IPR004827	Basic-leucine zipper domain
CDD	cd14707	5.44E-23	259	304	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.0E-13	259	301	No hit	No description
SuperFamily	SSF57959	1.69E-10	259	301	No hit	No description
Pfam	PF00170	4.8E-13	259	301	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	262	277	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence Send to blast
MGTQTIAATS GGGNGGGMQR PQIQSLSRQE SLYGLTLNEV QNHLGEPLHS MNLDELLKSI 60 FPVDENQGQG MEMEGFTQYA SGSGLQRQGS STMPHSLSKK TVDDVWRDIQ QGRLKKVHSI 120 EDRRPGHGHE RQPTLGEMTL EDFLVKAGVV AEGTVVKRKD NAAGNVDGMS IANQMAGVPD 180 YAQGAHWLHH YHPLQGMDQQ QRQQNVMEAY MPSRSVLQPM YTDSQVNISS PTVGALSDSH 240 VTGRKRVVSG DMADKLVERR QKRMIKNRES AARSRARKQA YTNELENKVS RLEEENKRLK 300 KMKVTIPFFT PSHGFFLPFF PLNE

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020583900.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	1e-75	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A2I0X2Y8	1e-156	A0A2I0X2Y8_9ASPA; ABSCISIC ACID-INSENSITIVE 5-like protein 2
STRING	XP_008792462.1	1e-116	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2707	38	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	6e-78	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]