PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

3D Structure |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

PEQU_15381

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

G2-like

Protein Properties

Length: 441aa MW: 49148.5 Da PI: 5.4938

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_15381	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	111.2	5.2e-35	224	278	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHerFv+av+qLGGsekAtPk +l+lmkv+gLt++hvkSHLQkYR+ PEQU_15381 224 KPRMRWTPELHERFVDAVKQLGGSEKATPKGVLKLMKVEGLTIYHVKSHLQKYRT 278 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.689	221	281	IPR017930	Myb domain
SuperFamily	SSF46689	3.94E-18	222	278	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	5.5E-33	222	280	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	8.7E-26	224	278	IPR006447	Myb domain, plants
Pfam	PF00249	1.7E-10	226	277	IPR001005	SANT/Myb domain
Pfam	PF14379	4.0E-22	306	352	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence Send to blast
MKQICSSGVS AVISSSLPTQ PSLFDERLHE PLSIVPQQTP LVSNSGVMEP LFSSASGFSS 60 DLHYFSVAPQ GRYPNGAPFI APSPSCGMPM PSVQSLASNY PLEATGISWV PESIQDIFSY 120 SDNMNIGSSQ LQNSPINNQI KNSVIAASDD LAKQNEWWDL GSEDWKDLLN DPVGPETQLK 180 VFVLLSFLVF SVSVVHVHQQ VPLHSGERSI MSSPSPSING APPKPRMRWT PELHERFVDA 240 VKQLGGSEKA TPKGVLKLMK VEGLTIYHVK SHLQKYRTAR YRPDSLEEKQ VYSLDEKASL 300 DLKTGMELTE ALRLQMEVQK RLHEQLEIQR NLQLRIEEQG RCLQLMFEQQ YKVGLDKLKP 360 PASDQDEQTA EYCCTTPPSP KSSAFEKERD EKGNSSSTTI AKEVKLTAVA DQQRVEDNGF 420 LRAKPPDDRR TEGDLKEHIS E

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence Send to blast

MKQICSSGVS AVISSSLPTQ PSLFDERLHE PLSIVPQQTP LVSNSGVMEP LFSSASGFSS  60
DLHYFSVAPQ GRYPNGAPFI APSPSCGMPM PSVQSLASNY PLEATGISWV PESIQDIFSY  120
SDNMNIGSSQ LQNSPINNQI KNSVIAASDD LAKQNEWWDL GSEDWKDLLN DPVGPETQLK  180
VFVLLSFLVF SVSVVHVHQQ VPLHSGERSI MSSPSPSING APPKPRMRWT PELHERFVDA  240
VKQLGGSEKA TPKGVLKLMK VEGLTIYHVK SHLQKYRTAR YRPDSLEEKQ VYSLDEKASL  300
DLKTGMELTE ALRLQMEVQK RLHEQLEIQR NLQLRIEEQG RCLQLMFEQQ YKVGLDKLKP  360
PASDQDEQTA EYCCTTPPSP KSSAFEKERD EKGNSSSTTI AKEVKLTAVA DQQRVEDNGF  420
LRAKPPDDRR TEGDLKEHIS E

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-30	224	282	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-30	224	282	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-30	224	282	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-30	224	282	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-30	224	282	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-30	224	282	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-30	224	282	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-30	224	282	2	60	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020575142.1	0.0	protein PHOSPHATE STARVATION RESPONSE 2-like isoform X2
TrEMBL	A0A2I0XIG2	0.0	A0A2I0XIG2_9ASPA; Protein PHR1-LIKE 1
STRING	XP_008801249.1	1e-134	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1971	37	89

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	5e-69	phosphate starvation response 1