PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

PEQU_14723

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Trihelix

Protein Properties

Length: 250aa MW: 28467.9 Da PI: 10.6384

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_14723	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59.9	6.4e-19	44	127	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ + +laLi+a+ +++++l+rg+l++ +W++v++++ ++ + ++++qC++k+e+l+kry+ +k+++ s + yf++++ PEQU_14723 44 CWSYEDTLALIDAYGDKWHSLGRGNLRASHWDDVAAAVarecpSSSAVPKTSVQCRHKIEKLRKRYRSEKQRSLF-----S--WLYFRKMD 127 7***********************************99999999********************9987664.....3..88888887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	4.1E-20	43	129	No hit	No description
SMART	SM00595	3.5E-6	52	134	IPR006578	MADF domain

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence Send to blast
MASASPSSSA AAGATASPAA SPFPFPAVPP RSLPHSSRRF PPPCWSYEDT LALIDAYGDK 60 WHSLGRGNLR ASHWDDVAAA VARECPSSSA VPKTSVQCRH KIEKLRKRYR SEKQRSLFSW 120 LYFRKMDAME RGAAAAEEAG LRFTIPKAVR SKLVGFRPSP RAAIKPVLEE MRRRVEEKRM 180 KMRRNDDGIR DVASALGIFG EEFFRMEQMK VDVSREMEKM RMEMELKRTE MILDCQRQIV 240 ETMVHRFMGK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020582007.1	0.0	trihelix transcription factor ASIL1
TrEMBL	A0A2I0VRV3	1e-111	A0A2I0VRV3_9ASPA; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5689	32	50

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	6e-38	Trihelix family protein