PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14704
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 865aa    MW: 101950 Da    PI: 11.0193
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14704genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix63.74e-20638727186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W+++e+ aLie +re++  lr g+l++++Weev++++        +   ++++qC++k+e+l+kr++ +++++ + ++ s  ++p+f+ ++
  PEQU_14704 638 CWSDDETFALIESYREKWPPLRFGNLRAADWEEVAAVVtrrcshVPTATPKTSVQCRHKIEKLRKRFRSERHRSLSLRPSS--SWPFFSLMK 727
                 7*************************************8888777778899**********************99975544..6****9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138378.4E-19637728No hitNo description
SMARTSM005958.1E-6646734IPR006578MADF domain
Sequence ? help Back to Top
Protein Sequence    Length: 865 aa     Download sequence    Send to blast
MKXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  60
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  120
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  180
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  240
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  300
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  360
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  420
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  480
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  540
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  600
XXXXXXXXXX XXXXXXXXPP GEPSPAPLPP RRGLPPPCWS DDETFALIES YREKWPPLRF  660
GNLRAADWEE VAAVVTRRCS HVPTATPKTS VQCRHKIEKL RKRFRSERHR SLSLRPSSSW  720
PFFSLMKSLE NPSPSDSDPG DARNTRSHHR QMANSGEELR FAIPKALRSK IVNPRSGGGR  780
AAKLSMEEMR RRLEKKKMEG KEKERDAVVD MASALRTIGD GFMRMERMKM DMARKTEKIR  840
LEMELKRTEM ILDLHSRVFD ALVKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP56893250
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.12e-16Trihelix family protein