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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_14651 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | ERF | ||||||||
Protein Properties | Length: 269aa MW: 29518.5 Da PI: 8.6768 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.2 | 4.1e-18 | 123 | 173 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr + +g+++AeIrdp+ +g r++lg+f++a +Aa+a+++a+ +++g PEQU_14651 123 KYRGVRKRT-WGKFAAEIRDPKRRG--SRVWLGTFDSALDAARAYDRAAFEMRG 173 8*****887.**********96554..*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 2.6E-31 | 122 | 182 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.72E-18 | 123 | 182 | No hit | No description |
Pfam | PF00847 | 4.7E-12 | 123 | 173 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.67 | 123 | 181 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.31E-21 | 123 | 182 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.0E-36 | 123 | 187 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 7.3E-13 | 124 | 135 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 7.3E-13 | 163 | 183 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence Send to blast |
MAFSPLSTID LIRHHLLGEH PASFLDDLLS SLPTPPSAPA PPLSDLTISD YLDPIQTITL 60 PPTSTKYRTE GFKFTDPPNS IIRFAVNSPS DSNFLNIVPT LEGFVGFGGD QRQPAVELFG 120 CRKYRGVRKR TWGKFAAEIR DPKRRGSRVW LGTFDSALDA ARAYDRAAFE MRGSKAILNF 180 PNEVVISGDS IQKPAAAKGK REREEGEVEG GKRVKRESLE RCRGNIPFEG PLSPSSLAAV 240 WEGSDGKDVY NLPPLSPHPA MGFPQLTVI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 2e-25 | 122 | 184 | 1 | 63 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
2gcc_A | 2e-25 | 122 | 184 | 4 | 66 | ATERF1 |
3gcc_A | 2e-25 | 122 | 184 | 4 | 66 | ATERF1 |
5wx9_A | 3e-25 | 123 | 183 | 14 | 74 | Ethylene-responsive transcription factor ERF096 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020586241.1 | 0.0 | ethylene-responsive transcription factor 5-like | ||||
TrEMBL | A0A2I0WBY8 | 2e-76 | A0A2I0WBY8_9ASPA; Ethylene-responsive transcription factor 5 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP103 | 37 | 465 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51190.1 | 2e-31 | ERF family protein |