PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Function |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

PEQU_14302

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

C2H2

Protein Properties

Length: 110aa MW: 11832.5 Da PI: 8.5222

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_14302	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.4	0.00096	14	36	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H +H PEQU_14302 14 FECKTCNRQFSTFQALGGHCASH 36 89**********99999998887 PP
2	zf-C2H2	13.5	0.00022	58	80	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+Cg F L H+r+H PEQU_14302 58 HECPICGLEFAVGQALGGHMRRH 80 79********************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57667	4.23E-9	12	80	No hit	No description
Pfam	PF13912	9.4E-11	13	38	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.4	14	36	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	9.91	14	41	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	16	36	IPR007087	Zinc finger, C2H2
Pfam	PF13912	4.4E-10	57	82	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.11	58	80	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	8.912	58	85	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	60	80	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 110 aa Download sequence Send to blast
MSLAHDAAAS MKVFECKTCN RQFSTFQALG GHCASHRKTR TAGGGGGGEG KTAKARAHEC 60 PICGLEFAVG QALGGHMRRH RSMTMKTEDK GAMWLDLNSM PAENDFEVFV

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that may be involved in stress responses. {ECO:0000250}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By heat stress. {ECO:0000269\|PubMed:18201973}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020579640.1	7e-76	zinc finger protein ZAT8-like isoform X1
Swissprot	Q9LX85	2e-23	ZAT8_ARATH; Zinc finger protein ZAT8
TrEMBL	A0A2I0VX86	1e-53	A0A2I0VX86_9ASPA; Zinc finger protein ZAT11
STRING	XP_006486058.1	1e-33	(Citrus sinensis)
STRING	XP_006436055.1	1e-33	(Citrus clementina)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP501	37	157

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	7e-27	C2H2 family protein