PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14129
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 236aa    MW: 26967 Da    PI: 6.1274
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14129genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR169.11.1e-2180167290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  Y++YA+ vGF+vrk+++++  ++++i+++++ C k+g+++e++ + ++ + ++a trtgC+a+++   + dg+w ++k+++ HnH+la
  PEQU_14129  80 HYCAYAHYVGFTVRKDHTTYWAKSKQIKSNDYICGKSGHKRESQLA-TTVKYRKADTRTGCQAMVHYAIDLDGNWTIEKFVESHNHPLA 167
                 69****************************************9999.8888999*********************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031015.1E-1980167IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MGVPEVSVHG DPVGHESMVL GERAERGDFS LNEEFEHMDD EMNVNVFETE IYRAETDCND  60
LIARSFLNTV VRTEEENYKH YCAYAHYVGF TVRKDHTTYW AKSKQIKSND YICGKSGHKR  120
ESQLATTVKY RKADTRTGCQ AMVHYAIDLD GNWTIEKFVE SHNHPLAESG DKHLLGSSRK  180
ISELNANLLR SMTDSGIRAV DAFNFLATEV GGVENLKCTR QDAYNFIQRD KRSRIE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020587208.11e-146protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A2I0VS863e-55A0A2I0VS86_9ASPA; Protein FAR1-RELATED SEQUENCE 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-16FAR1-related sequence 5