PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_13284 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | WRKY | ||||||||
Protein Properties | Length: 176aa MW: 19747.9 Da PI: 6.2936 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 86.9 | 1.8e-27 | 6 | 65 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 +Dg++WrKYGqK++ g++fpr YYrCt++ gC ++k+v+rs++++++++itY+g H++ PEQU_13284 6 EDGHSWRKYGQKDILGAKFPRCYYRCTHRhshGCLATKHVQRSDNNTSIFNITYRGAHTC 65 8***************************99999*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 20.908 | 1 | 63 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.7E-23 | 5 | 65 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.5E-38 | 5 | 67 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.1E-25 | 5 | 65 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.4E-25 | 6 | 65 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence Send to blast |
MEIAIEDGHS WRKYGQKDIL GAKFPRCYYR CTHRHSHGCL ATKHVQRSDN NTSIFNITYR 60 GAHTCINGAH KPLISTNEQI IHQNQSFKVK NEALSSTDQK PESPSSFSFP STSAICLKPE 120 SNVFSSASNT ENYVGLDSEI ADIFCASSSI ESSQMLGMEF GVEQFVLDSE FPFDFY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 8e-20 | 4 | 63 | 13 | 74 | Disease resistance protein RRS1 |
5w3x_D | 8e-20 | 4 | 63 | 13 | 74 | Disease resistance protein RRS1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:20409006). May regulate the early events of leaf senescence (PubMed:17369373, PubMed:20409006). Negatively regulates the expression of ESR/ESP (PubMed:20409006). Together with WRKY46 and WRKY70, promotes resistance to P.syringae, probably by enhancing salicylic acid (SA)- dependent genes. Contributes to the suppression of jasmonic acid (MeJA)-induced expression of PDF1.2 (PubMed:22325892). {ECO:0000269|PubMed:17369373, ECO:0000269|PubMed:20409006, ECO:0000269|PubMed:22325892}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid (SA) (PubMed:22268143, PubMed:22325892). Strong accumulation during leaf senescence (PubMed:22268143). Down-regulated by jasmonate. Triggered by P.syringae (PubMed:22325892). {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11506370, ECO:0000269|PubMed:17369373, ECO:0000269|PubMed:22268143, ECO:0000269|PubMed:22325892}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020576832.1 | 1e-130 | probable WRKY transcription factor 30 | ||||
Swissprot | Q9SUP6 | 1e-26 | WRK53_ARATH; Probable WRKY transcription factor 53 | ||||
TrEMBL | A0A2I0XJQ6 | 2e-45 | A0A2I0XJQ6_9ASPA; Putative WRKY transcription factor 53 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1086 | 38 | 131 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23810.1 | 8e-29 | WRKY family protein |