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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
PEQU_12754 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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| Family |
C2H2 |
| Protein Properties |
Length: 237aa MW: 26746.7 Da PI: 8.4798 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PEQU_12754 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 16.3 | 2.8e-05 | 3 | 24 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23
+C+ C +sF+++ L H+r H
PEQU_12754 3 SCNVCERSFPTRRALGGHMRIH 24
6*******************99 PP
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| 2 | zf-C2H2 | 19 | 3.7e-06 | 58 | 78 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23
C++Cg+ Fs++s+L +H + H
PEQU_12754 58 CSKCGEKFSSWSSLFNHTKFH 78
******************998 PP
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| 3 | zf-C2H2 | 13.9 | 0.00016 | 212 | 234 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y C+ Cg++F++ L H +H
PEQU_12754 212 YNCKTCGRTFPSYQALGGHRARH 234
89*************99999988 PP
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| Protein Features
? help Back to Top |
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| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| SMART | SM00355 | 0.039 | 2 | 24 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 9.39 | 2 | 29 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 1.84E-9 | 3 | 24 | No hit | No description |
| Gene3D | G3DSA:3.30.160.60 | 6.0E-4 | 4 | 24 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| Pfam | PF13912 | 1.8E-5 | 4 | 24 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 4 | 24 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 1.84E-9 | 51 | 78 | No hit | No description |
| SMART | SM00355 | 0.88 | 56 | 78 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 10.803 | 56 | 83 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 58 | 78 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 2.9E-5 | 209 | 235 | No hit | No description |
| Pfam | PF13912 | 7.3E-13 | 211 | 236 | IPR007087 | Zinc finger, C2H2 |
| PROSITE profile | PS50157 | 10.055 | 212 | 237 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.043 | 212 | 234 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE pattern | PS00028 | 0 | 214 | 234 | IPR007087 | Zinc finger, C2H2 |
| Sequence ? help Back to Top |
| Protein Sequence Length: 237 aa
Download sequence Send
to blast |
RPSCNVCERS FPTRRALGGH MRIHLLPNSD KEPMRRYGFR VNPRKTWKLM ENENDMLCSK 60
CGEKFSSWSS LFNHTKFHSE TEGDQLREED EEFAEKNKNS NSNGSYEEGG DGIETQSDSE 120
VNAMERSGSL GSSIAYEIEQ TAGAFCLMML SRGAGSVTDS SDKASVVTDD EVEKRKSNSV 180
SEFSLKLRKS KASSRRKDLH YVASGIEKQS RYNCKTCGRT FPSYQALGGH RARHMRI
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