PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_11552
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 317aa    MW: 35533.6 Da    PI: 4.4715
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_11552genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.21.9e-102422821055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  PEQU_11552 242 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 282
                 9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.148232281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.4E-14234296IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-12237292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.3E-11238287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.82E-11241286No hitNo description
PfamPF000109.4E-8242282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009733Biological Processresponse to auxin
GO:0016049Biological Processcell growth
GO:0048766Biological Processroot hair initiation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MESFGVVPEI CWNSFEEQMQ FDHETNAMAQ LLESQIYGYD HQIREQQSSG LMSMLWPYNE  60
AGAFCYLSDP NTNYEGINYH CAMEDEQLAA PFFQIDSVNP VEGLVSSQEV NSDESTECNV  120
VTELELQQNW RMIQAEECKV VVVPAERQNK KARAQKALKN SRSKKKQKGS GGGSDEEESN  180
AGLNVQSTSS YSSDDDYMNN SQEITEGGSV NSSSKGSTAL NLNGKTRAGR GAATDPQSLY  240
ARKRRERINE RLRILQNLVP NGTKVDISTM LEEAVQYVKF LQLQIKLLSS DELWMYAPLA  300
YNGMNIGLDL MIPTNKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020677402.11e-175transcription factor bHLH54-like
TrEMBLA0A2I0VZC31e-172A0A2I0VZC3_9ASPA; Transcription factor bHLH85
STRINGXP_008792628.13e-73(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43103270
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.12e-45bHLH family protein