PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

PEQU_11498

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

C2H2

Protein Properties

Length: 203aa MW: 22090.5 Da PI: 8.6841

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_11498	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00084	87	109	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C++C+ksF + L H +H PEQU_11498 87 YGCNICNKSFDSYQALGGHRTSH 109 67********9999998888777 PP
2	zf-C2H2	11.2	0.0011	139	161	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F++ L H r+H PEQU_11498 139 HVCNICAKNFPSGQALGGHKRSH 161 79******************999 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57667	3.1E-7	85	161	No hit	No description
PROSITE profile	PS50157	10.533	87	114	IPR007087	Zinc finger, C2H2
Pfam	PF13912	3.2E-11	87	111	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.17	87	109	IPR015880	Zinc finger, C2H2-like
PROSITE pattern	PS00028	0	89	109	IPR007087	Zinc finger, C2H2
Pfam	PF13912	5.8E-11	139	162	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.59	139	161	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	9.64	139	162	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	141	161	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence Send to blast
MLAREHANLI YDSNDKFSLT IGSGNKVHSF PCEDGDQQSK KLKVSFFASS SDYGDINPAV 60 LKNEKRSLSI QCDSESGKQS SCNRKRYGCN ICNKSFDSYQ ALGGHRTSHS KVRGEFKKLI 120 NQNHDSQTVK KLPKNFGNHV CNICAKNFPS GQALGGHKRS HSIAAAAVVV SSADNTAAHP 180 HPTPMEVEPN SIDLNLPATD NDS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020591170.1	1e-148	zinc finger protein ZAT9-like
TrEMBL	A0A2I0W8T0	2e-54	A0A2I0W8T0_9ASPA; Zinc finger protein ZAT9

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP37536	2	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53600.1	2e-17	C2H2 family protein