 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PEQU_11472 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
|
| Family |
TCP |
| Protein Properties |
Length: 292aa MW: 32589.4 Da PI: 6.8925 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PEQU_11472 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 93.4 | 4.6e-29 | 56 | 138 | 3 | 66 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...................s 66
++kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WL+++a+ +i++l +
PEQU_11472 56 VGKDRHSKVSTIKGLRDRRVRLSIPTAIQVYDLQDKLGLNQPSKVVDWLINAAQNEIDKLLPEpllpsgnsfiqfpqtdlnsN 138
68************************************************************955544443333322221110 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 292 aa
Download sequence Send
to blast |
MMKLYKMIKD SKVKEDQIKQ EEGGTIDYTQ HQMSKRLCSS LPNQRIARLS QSDHFVGKDR 60
HSKVSTIKGL RDRRVRLSIP TAIQVYDLQD KLGLNQPSKV VDWLINAAQN EIDKLLPEPL 120
LPSGNSFIQF PQTDLNSNSI RAQAFSANAD PFMLISNNYV DDITSFPKPT LNSFHSYYQM 180
DPYASHVGNN HSSQEVFSND FHLASASSSL SSSLTSMPAE TQIVMPSSFS SYLTGTNSIQ 240
TPSTFAELLP WNSSSINFKQ YVQQDEAARQ LVNSTVYKDS GAGYGSSAAD FF
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zkt_A | 4e-17 | 62 | 115 | 1 | 54 | Putative transcription factor PCF6 |
| 5zkt_B | 4e-17 | 62 | 115 | 1 | 54 | Putative transcription factor PCF6 |
