![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PEQU_11118 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 215aa MW: 24880.5 Da PI: 9.8592 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35 | 3.6e-11 | 91 | 132 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k+ +W A I++ +k+++lg+ g+ e+Aa+++++a+ PEQU_11118 91 LRGVYF--KNMKWQAAIKVE-----KKQIHLGTVGSQEDAARLYDRAAF 132 59**98..47*********6.....6********************985 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 1.7E-4 | 90 | 147 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.37E-7 | 91 | 134 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 9.3E-5 | 91 | 133 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.6E-6 | 93 | 142 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 215 aa Download sequence Send to blast |
MGLRYITLTC STAVSHGQSK ETKTNGTMFC QIFMKQALDR QLCLLQALQR RKLIIIFQVS 60 FSGLYLWHCK DIRHRKRYRR KLYEDQEPCI LRGVYFKNMK WQAAIKVEKK QIHLGTVGSQ 120 EDAARLYDRA AFMCGRQPNF ELPEEEKREL SHYNWEEFLA VTRNAINHKK LQRRIGGGRK 180 KGGIQTRGSD VEEPERGTCG SQSVSDDGEV EGFAS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020682042.1 | 3e-88 | ethylene-responsive transcription factor-like protein At4g13040 isoform X1 | ||||
TrEMBL | A0A2I0WM64 | 6e-87 | A0A2I0WM64_9ASPA; Ethylene-responsive transcription factor-like protein | ||||
STRING | GSMUA_Achr6P06510_001 | 2e-57 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7516 | 35 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G13040.2 | 2e-42 | ERF family protein |