 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PEQU_10550 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
|
| Family |
MYB |
| Protein Properties |
Length: 247aa MW: 27024.5 Da PI: 8.869 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PEQU_10550 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 53.3 | 6.3e-17 | 11 | 56 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEd ll +v +G ++W+ I++ ++ gR++k+c++rw +
PEQU_10550 11 KGSWSPEEDALLMSLVSTHGARNWSQISAGIQ-GRSGKSCRLRWCNQ 56
799*****************************.***********985 PP
|
| 2 | Myb_DNA-binding | 62.3 | 1e-19 | 65 | 107 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++Tt+Ed ++v+a++++G++ W+tIar ++ gRt++++k++w++
PEQU_10550 65 PFTTQEDRIIVEAHAKHGNK-WATIARLLP-GRTDNSIKNHWNST 107
89******************.*********.***********986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 247 aa
Download sequence Send
to blast |
MDTGEEDDRV KGSWSPEEDA LLMSLVSTHG ARNWSQISAG IQGRSGKSCR LRWCNQLSPD 60
VHHRPFTTQE DRIIVEAHAK HGNKWATIAR LLPGRTDNSI KNHWNSTLRR RRRAEGGASL 120
KVPERSSPDS ESGGKKQCRR ADLNLNLAEP MTPEVGDPVT MLTLSLPGEI PAVAAASAER 180
GRCPGKALLG SPHFMSAMRK MIEEEVQRYM SGLRLDCGGG GGGGGWRRWS LQCAEVGEST 240
QGLILSF
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1a5j_A | 1e-36 | 8 | 111 | 4 | 107 | B-MYB |
| 1gv2_A | 1e-36 | 10 | 111 | 3 | 104 | MYB PROTO-ONCOGENE PROTEIN |
| 1h88_C | 7e-36 | 10 | 111 | 57 | 158 | MYB PROTO-ONCOGENE PROTEIN |
| 1h89_C | 7e-36 | 10 | 111 | 57 | 158 | MYB PROTO-ONCOGENE PROTEIN |
| 1mse_C | 2e-36 | 10 | 111 | 3 | 104 | C-Myb DNA-Binding Domain |
| 1msf_C | 2e-36 | 10 | 111 | 3 | 104 | C-Myb DNA-Binding Domain |
| Search in ModeBase |
