 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PEQU_09649 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
|
| Family |
MYB_related |
| Protein Properties |
Length: 177aa MW: 20052.7 Da PI: 10.4731 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PEQU_09649 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 50.9 | 3.5e-16 | 32 | 76 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
r +WT++E++++++a +++G W++I +++g ++t q++s+ qk+
PEQU_09649 32 REKWTEDEHKRFLEALQLYGRA-WRLIEEHIG-TKTSVQIRSHAQKF 76
789*****************88.*********.************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0009734 | Biological Process | auxin-activated signaling pathway |
| GO:0010600 | Biological Process | regulation of auxin biosynthetic process |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 177 aa
Download sequence Send
to blast |
MNPLNQLLSA AFAEDVEMAP KIRKPYIISK QREKWTEDEH KRFLEALQLY GRAWRLIEEH 60
IGTKTSVQIR SHAQKFFSKV ERGSNNKVQI PPPRPKRKSS HPYPRKNQFF GKLNVSPTPK 120
LFVSEEQNGS PTSVLSATSS EPLNPFILNK HNRSTAPFAS AEGSNEEDNG IQSVSTP
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Morning-phased transcription factor integrating the circadian clock and auxin pathways. Binds to the evening element (EE) of promoters. Does not act within the central clock, but regulates free auxin levels in a time-of-day specific manner. Positively regulates the expression of YUC8 during the day, but has no effect during the night. Negative regulator of freezing tolerance. {ECO:0000269|PubMed:19805390, ECO:0000269|PubMed:23240770}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Circadian-regulation. Peak of transcript abundance near subjective dawn. Down-regulated and strongly decreased amplitude of circadian oscillation upon cold treatment. {ECO:0000269|PubMed:19805390, ECO:0000269|PubMed:23240770}. |
