 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PEQU_09578 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 196aa MW: 21777.2 Da PI: 4.7093 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PEQU_09578 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 58.5 | 1.1e-18 | 25 | 77 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
++++ +eq+++Le+ F ++ + +++++LA++lgL+ rqV vWFqNrRa++k
PEQU_09578 25 KRRLGTEQVRALEQSFDVENRLEPDRKARLAQELGLQPRQVAVWFQNRRARWK 77
456789**********************************************9 PP
|
| 2 | HD-ZIP_I/II | 130.9 | 5e-42 | 24 | 115 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
kkrrl +eqv++LE+sF+ e++Lep+rK++la+eLglqprqvavWFqnrRAR+ktkqlE+d++aLk++ydal+ + ++L++++++L ++l++
PEQU_09578 24 KKRRLGTEQVRALEQSFDVENRLEPDRKARLAQELGLQPRQVAVWFQNRRARWKTKQLERDFSALKSRYDALRLDYDSLRRDNHSLVAQLSS 115
9**************************************************************************************99975 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 196 aa
Download sequence Send
to blast |
MIFEDDNEDG ICSGSIAATV AAMKKRRLGT EQVRALEQSF DVENRLEPDR KARLAQELGL 60
QPRQVAVWFQ NRRARWKTKQ LERDFSALKS RYDALRLDYD SLRRDNHSLV AQLSSLKSKL 120
AGEDDVKQGK EKPQPAIGAE GACESDSSAV LNLDLFKVEE EGWEESCGAG LFVDEHGSTL 180
AWFSAELAAG EGGASW
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 48 | 54 | DRKARLA |
| 2 | 71 | 79 | RRARWKTKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
