 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PEQU_09521 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
|
| Family |
NAC |
| Protein Properties |
Length: 397aa MW: 45363.4 Da PI: 6.7778 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PEQU_09521 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 168.6 | 2e-52 | 17 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98
+ pGfrFhPtdeelv +yL++k+++k+l++ e i+++diyk++PwdLpk+++++ekewyf+++rd+ky+++ r+nr+t++g+Wkatg+d++++s+ + +
PEQU_09521 17 MLPGFRFHPTDEELVGFYLRRKIQQKPLSI-ELIRQLDIYKYDPWDLPKMAATGEKEWYFYCPRDRKYRNSARPNRVTSAGFWKATGTDRPIYSTeGVK 114
579***************************.89***************9888999***************************************84445 PP
NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128
+glkk+Lvfykgra kg ktdW+mhe+rl
PEQU_09521 115 CIGLKKSLVFYKGRAAKGIKTDWMMHEFRL 144
5***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 397 aa
Download sequence Send
to blast |
LREMEGKNDM DKVDEVMLPG FRFHPTDEEL VGFYLRRKIQ QKPLSIELIR QLDIYKYDPW 60
DLPKMAATGE KEWYFYCPRD RKYRNSARPN RVTSAGFWKA TGTDRPIYST EGVKCIGLKK 120
SLVFYKGRAA KGIKTDWMMH EFRLPSLSDP TISKRPMDKN FIPATEAWAI CRIFKKTNTA 180
AQKALTHSWF SSLPEATDFH KYSLPYVTNG AQFGSENISC KTEIGSLIQF GCSSGLEQHT 240
YPSLDVTNFK QFNLVSCMSP EMATSFTFSP PETSTDSKPL IDATSMLLNV SSAVLQDMEK 300
PSPSIDFGQQ QQSNGFTVTF PLEDNGNLGI EEEDMMYKKT VSSICDRNTH WGNMRYMNFP 360
FNLAPNPSDE WKPNLPWDSV FFPSEISMGY SSQKNDT
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-53 | 6 | 182 | 5 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-53 | 6 | 182 | 5 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-53 | 6 | 182 | 5 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-53 | 6 | 182 | 5 | 171 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 1e-53 | 6 | 182 | 5 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-53 | 6 | 182 | 5 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane. {ECO:0000269|PubMed:19081078}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Repressed by SMB in oriented-divised root cap stem cells. {ECO:0000269|PubMed:19081078}. |
