PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_09503
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB
Protein Properties Length: 563aa    MW: 63671.8 Da    PI: 6.7585
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_09503genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.93e-152367348
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +WT+eEd+ll + v+ +G ++W+ Ia+ +  ++t+ qc+ rw++yl
       PEQU_09503 23 SWTQEEDDLLRNQVAVHGCDNWTIIAAQFK-NKTGRQCRRRWLTYL 67
                     7****************************9.*************97 PP
2Myb_DNA-binding43.57.5e-1473116146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +g W++eEd ll +a k +G++ W+ Ia+ +  gRt++ +k+r+ +
       PEQU_09503  73 KGGWSQEEDMLLCEAQKIFGNR-WTEIAKVVK-GRTDNAVKNRFST 116
                      688*******************.********9.**********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129422.2771671IPR017930Myb domain
SuperFamilySSF466896.36E-2719114IPR009057Homeodomain-like
SMARTSM007174.0E-132069IPR001005SANT/Myb domain
CDDcd001671.11E-122367No hitNo description
Gene3DG3DSA:1.10.10.608.5E-212474IPR009057Homeodomain-like
PfamPF139211.5E-162484No hitNo description
SMARTSM007171.7E-1472120IPR001005SANT/Myb domain
PROSITE profilePS5129417.34872122IPR017930Myb domain
Gene3DG3DSA:1.10.10.606.2E-1975121IPR009057Homeodomain-like
CDDcd001671.68E-1076117No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009553Biological Processembryo sac development
GO:0010052Biological Processguard cell differentiation
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 563 aa     Download sequence    Send to blast
MNSDHAAPAA AVTQAKKDRH MVSWTQEEDD LLRNQVAVHG CDNWTIIAAQ FKNKTGRQCR  60
RRWLTYLNTE CKKGGWSQEE DMLLCEAQKI FGNRWTEIAK VVKGRTDNAV KNRFSTLCRK  120
RAKHHTISKE NNDSYILPSK KKIMLEPSAN KQHFGCGSSD QAEASSSYER LATDHGISGA  180
ESRPPLAVLT QNFKNLSCFP AQCHPDSSIK PTSCDNCEVQ RNFLRRDDPK LTALLQQAEL  240
LSTLAVKACS ENKSKSLEDA WKEGGTLSTF SGMDFLLDNF EAVFKDFQCA DTEIQLLTRQ  300
YTLINLVNLF VILVHFVLND SLLNRDGDLE DSQASSEMTT GCTQDDPGNN MDKHQLEHCS  360
TGCNAGHSHQ HEAIPAPLKF VCQGEAMSSF LELAQNGEKL PVSSNSEFDS PLKTIPPFHS  420
FTEEIPSPEF SFSVRHVGSQ YSVPYRKERL RVIILRPLEL MVNVMISRVV LEQDVEDIAW  480
QPKPTKNALD YRRHRNQILL LFLLSGVQPE PIQWRQELVN PGIKPVNDDR GEGTHHLIAD  540
ITLPEHHHTQ KSQTVHYNSQ EIR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A1e-272412110107B-MYB
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020580947.10.0transcription factor MYB124-like isoform X3
TrEMBLA0A455LA900.0A0A455LA90_9ASPA; Transcription factor MYB124-like isoform X3
TrEMBLA0A455LAB80.0A0A455LAB8_9ASPA; Transcription factor MYB124-like isoform X1
STRINGXP_008780751.11e-107(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP89033847
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14350.28e-84MYB family protein