PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_08903
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 386aa    MW: 43358.5 Da    PI: 6.2819
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_08903genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.00016628123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C+k+F++  +L  H+r+H
  PEQU_08903  6 HRCKICSKCFPSGRSLGGHMRSH 28
                79********************9 PP
2zf-C2H217.71e-057796221
                EETTTTEEESSHHHHHHHHH CS
     zf-C2H2  2 kCpdCgksFsrksnLkrHir 21
                +C+ Cgk F+++  L  H+r
  PEQU_08903 77 QCKVCGKEFPSWKALFGHMR 96
                7******************8 PP
3zf-C2H215.55e-05242264123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C+dC++sF++   L  H  +H
  PEQU_08903 242 YQCEDCNRSFPSYQALGGHRASH 264
                 9***********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576679.39E-10528No hitNo description
PfamPF139125.4E-9530IPR007087Zinc finger, C2H2
PROSITE profilePS501579.681628IPR007087Zinc finger, C2H2
SMARTSM003550.011628IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280828IPR007087Zinc finger, C2H2
SuperFamilySSF576679.39E-107198No hitNo description
PROSITE profilePS501579.6476101IPR007087Zinc finger, C2H2
SMARTSM003550.00167698IPR015880Zinc finger, C2H2-like
PfamPF139123.8E-977100IPR007087Zinc finger, C2H2
PROSITE patternPS0002807898IPR007087Zinc finger, C2H2
SuperFamilySSF576673.58E-8241264No hitNo description
PfamPF139125.9E-11241266IPR007087Zinc finger, C2H2
SMARTSM003550.013242264IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.45242269IPR007087Zinc finger, C2H2
PROSITE patternPS000280244264IPR007087Zinc finger, C2H2
SuperFamilySSF576673.58E-8301328No hitNo description
PROSITE profilePS5015710.533306333IPR007087Zinc finger, C2H2
SMARTSM003550.074306328IPR015880Zinc finger, C2H2-like
PfamPF139121.7E-11306328IPR007087Zinc finger, C2H2
PROSITE patternPS000280308328IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
LQMERHRCKI CSKCFPSGRS LGGHMRSHMR FYSSVTELQK LDKSSYELRE NPRKTCKLSD  60
FAGEDPTSSS SSLKIKQCKV CGKEFPSWKA LFGHMRCHSD KICRRSFEAD EEKEDHEEGE  120
VSWKQWSKMS PAASSVTEYE QELEDVAVSL MLLSRDISGC WSIAAESSDK QSEVMEEEVP  180
IKRSGEFEDL DWEYTGEASG KPKILTSAEF GKKRARIDEK GKHLSAREAK LGKEETKLES  240
RYQCEDCNRS FPSYQALGGH RASHKRIRGC CFPNPNADSD YKIETFAEHM TVSEIEDSHS  300
KKNRIHECSI CGKIFGSGQA LGGHKRSHLM SNADADSGVD MAAAAAAAVE VPEMLDLNLP  360
APVDEESSNE KPWWTGESMI NSISNR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020579768.10.0zinc finger protein ZAT9-like
TrEMBLA0A2I0WV280.0A0A2I0WV28_9ASPA; Zinc finger protein ZAT4
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38613573
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.11e-24C2H2-like zinc finger protein