 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PEQU_08687 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
|
| Family |
Trihelix |
| Protein Properties |
Length: 279aa MW: 30980.3 Da PI: 8.882 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PEQU_08687 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 33.5 | 1.1e-10 | 22 | 109 | 1 | 83 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergf..erspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83
+W++ v +L++a ++++e +r+kl++ +W++v++++ r+ g ++p qCk+k+++++kr + + ++ + + + s++p+f
PEQU_08687 22 EWSEGAVDCLLDACESKWELRSRAKLMGRDWDDVARRVsaRADGSrpAKTPSQCKNKIDSMKKRSRSEFASTVAGeRGGGFSRWPLFG 109
5*************************************88555554478**************9887766555552344556777775 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 279 aa
Download sequence Send
to blast |
METKPLLTNP TNHPVAAGRR DEWSEGAVDC LLDACESKWE LRSRAKLMGR DWDDVARRVS 60
ARADGSRPAK TPSQCKNKID SMKKRSRSEF ASTVAGERGG GFSRWPLFGG IQRLMCCKND 120
GGGALELEGS PVAAVLVPTG GAPAMNGCVA AAKEPLEGEG KNKEHNQAQM DAEHSKPTNE 180
AYKEREDEEK KKKMLTKKNK KKRKLQEREE GDEFEVMESI QSLAEIALKA DQLRMEAMRD 240
VENIWAQAEA KKGELDLKRT EITAITQLKI ARLLCRRAG
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 189 | 203 | KKKKMLTKKNKKKRK |
| 2 | 199 | 204 | KKKRKL |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G54390.1 | 6e-47 | sequence-specific DNA binding transcription factors |
