PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

PEQU_08069

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 277aa MW: 32183.6 Da PI: 9.0903

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_08069	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.1	5.2e-17	22	107	2	88
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 Y++YA++ GFsvrk++ ++++ ++++fvC + +++e k + + + +r+ tr gC ++ + + +g+w v+k+ + HnH+ PEQU_08069 22 IYCAYAHHSGFSVRKEHGAFWPNSRNLKTKDFVCGRASFKKELKIT-QIVKYKRVDTRSGCPTMICYSIDVEGNWTVKKFIESHNHS 107 7******************9****************9988.88889********************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.6E-15	22	108	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence Send to blast
KDQSTNLLLE TVVHNDKEAY KIYCAYAHHS GFSVRKEHGA FWPNSRNLKT KDFVCGRASF 60 KKELKITQIV KYKRVDTRSG CPTMICYSID VEGNWTVKKF IESHNHSANP GDKHLLRLSR 120 KYKQVNAEVL RSMTQSEIRP RETFNFLATK VGGVENLECT KIDVFNFIQI DRRCRIENDD 180 VNALLQLFTE RCAEDSLFQW DFEIDESGRL KLFFFFKPQR SESTNNICHG VAKPTSSITD 240 CFLGLKQVMR TWRRNEKHED YKSDQSAITP VAKTALH

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020598366.1	1e-109	putative protein FAR1-RELATED SEQUENCE 10

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-14	FAR1-related sequence 5