PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_07637
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB
Protein Properties Length: 347aa    MW: 38901.1 Da    PI: 6.8617
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_07637genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.88e-162672147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W + Ed++l+++v+++G g+W+++ +  g+ R++k+c++rw ++
       PEQU_07637 26 KGPWMPAEDKILKEYVRKHGEGNWNAVQKNSGLQRCGKSCRLRWVNH 72
                     79******************************************997 PP
2Myb_DNA-binding50.45.1e-1680122246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       +++ eE+ l++++++++G++ W+ Ia+ ++ gRt++++k++w++
       PEQU_07637  80 ESFSLEEETLIIRLHARHGNK-WAYIAKQLP-GRTDNEIKNYWNT 122
                      689******************.*********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.0242172IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.7E-222276IPR009057Homeodomain-like
SuperFamilySSF466896.64E-2925120IPR009057Homeodomain-like
SMARTSM007171.8E-122575IPR001005SANT/Myb domain
PfamPF002491.9E-142672IPR001005SANT/Myb domain
CDDcd001672.60E-102873No hitNo description
PROSITE profilePS5129423.48374128IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.4E-2377126IPR009057Homeodomain-like
SMARTSM007171.1E-1378126IPR001005SANT/Myb domain
PfamPF002492.4E-1479122IPR001005SANT/Myb domain
CDDcd001672.96E-1181122No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MRPPAVVKKE RASTTDIDSG GQLLKKGPWM PAEDKILKEY VRKHGEGNWN AVQKNSGLQR  60
CGKSCRLRWV NHFRPNLKKE SFSLEEETLI IRLHARHGNK WAYIAKQLPG RTDNEIKNYW  120
NTRIKQRKKA NLPLYPPDVG MPISLRIDEP ELNVPWIAAN SPPPALKPSQ STLSSFTSAS  180
PPLSEHYGFS FEDPNRGRNI SFQPPYFPSP VKKGLENFDL GPLPYSVKEE LPLSQFSSNY  240
GGEQMPQCNS GLLHDLIQES CKEDKLLSST CLAIDFLGIK MIEEMLETDG SALIDMILAE  300
TAVPKTVLPD WYNNCSNGGE SSNCPSSVTN DEQFGLDMLD THSWGGI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1mse_C9e-27231271104C-Myb DNA-Binding Domain
1msf_C9e-27231271104C-Myb DNA-Binding Domain
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020577623.10.0transcription factor MYB120-like
TrEMBLA0A455LAE61e-130A0A455LAE6_9ASPA; Transcription factor MYB120-like protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP74203750
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55020.11e-60myb domain protein 120