 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PEQU_07503 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
|
| Family |
MYB |
| Protein Properties |
Length: 326aa MW: 36565.9 Da PI: 8.245 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PEQU_07503 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 51.7 | 2.1e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l+d++++ G++ +W+ +r g++R++k+c++rw +yl
PEQU_07503 14 KGPWTPEEDQKLIDYIQKQGSHgSWRHLPRIAGLNRCGKSCRLRWTNYL 62
79*********************************************97 PP
|
| 2 | Myb_DNA-binding | 55.8 | 1e-17 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++++eE++l+++++ ++G++ W++I+ +++ gRt++++k++w+++l
PEQU_07503 68 RGKFSEEEEKLIINLHSMFGNK-WSLISTKLP-GRTDNEIKNYWNTHL 113
89********************.*********.************996 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MVRSPSREET GLKKGPWTPE EDQKLIDYIQ KQGSHGSWRH LPRIAGLNRC GKSCRLRWTN 60
YLRPDIKRGK FSEEEEKLII NLHSMFGNKW SLISTKLPGR TDNEIKNYWN THLKKKLLLM 120
GIDPVTHRRR TDLELLANFP KLLSSSTNSS SFINSLMENT LGIQADTVQL ARIQIMQVLF 180
QVLLKTASFS SSSSSSSSSN PNAYSNLVLS NLLSSSQLPP LQTFSNNSNG SSVPLETSSF 240
GESFQTPNHS HGFPVQNSEN NSKQLLFHSN GNNMLASTES YSVDQKQDQI DLNETSAANS 300
VNARAMDTLN LTELDDSDLS WKDVLE
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that acts as negative regulator of lateral root (LR) development. Required for normal auxin responses during LR development. May be part of a negative feedback loop stimulated specifically in the endodermis upon LR initiation to ensure that LRs are formed only in the correct place. {ECO:0000269|PubMed:24902892}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by abscisic acid (ABA), auxin and gravity in roots. {ECO:0000269|PubMed:24902892}. |
