PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_07132 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | G2-like | ||||||||
Protein Properties | Length: 247aa MW: 27680.2 Da PI: 6.7974 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 99.8 | 1.8e-31 | 17 | 71 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wt eLHe+Fv+av++LGG+ekAtPk +++lm v+gLtl+h+kSHLQkYRl PEQU_07132 17 KPRLKWTRELHEQFVDAVSELGGAEKATPKLLMRLMAVPGLTLYHLKSHLQKYRL 71 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 9.357 | 14 | 74 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 3.2E-30 | 15 | 74 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.56E-15 | 17 | 74 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.9E-21 | 17 | 72 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 7.0E-7 | 19 | 70 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 1.1E-16 | 101 | 149 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence Send to blast |
MPNRLDHHGP VLSADGKPRL KWTRELHEQF VDAVSELGGA EKATPKLLMR LMAVPGLTLY 60 HLKSHLQKYR LAKNRDPSTL TNDKKTKDDE LKNRNDKTQP QLNEAILQQI QIDVHRKLQE 120 QIEVQKHLQL RIEAQGKYLQ SVLKIAQETL AGYSSTLGTE AARSELSELV SVVETECLSS 180 SLNHGGLISK GNQNADSSMD SCLTSELFEL REKYAGQHKL EASSCSNPVN GRTAETRGEI 240 EEFDLNN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 7e-21 | 16 | 75 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 7e-21 | 16 | 75 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 7e-21 | 16 | 75 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 7e-21 | 16 | 75 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 7e-21 | 16 | 75 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 7e-21 | 16 | 75 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 7e-21 | 16 | 75 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 7e-21 | 16 | 75 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that may activate the transcription of specific genes involved in nitrogen uptake or assimilation (PubMed:15592750). Acts redundantly with MYR1 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:15592750}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by nitrogen deficiency. {ECO:0000269|PubMed:15592750}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020575610.1 | 0.0 | myb-related protein 2-like isoform X1 | ||||
Refseq | XP_020575611.1 | 0.0 | myb-related protein 2-like isoform X1 | ||||
Refseq | XP_020575612.1 | 0.0 | myb-related protein 2-like isoform X1 | ||||
Swissprot | Q9SQQ9 | 7e-59 | PHL9_ARATH; Myb-related protein 2 | ||||
TrEMBL | A0A2I0VZF6 | 1e-134 | A0A2I0VZF6_9ASPA; Myb family transcription factor APL | ||||
STRING | XP_008802581.1 | 2e-89 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP11264 | 30 | 38 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04030.3 | 2e-53 | G2-like family protein |
Publications ? help Back to Top | |||
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