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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
PEQU_06996 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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| Family |
TCP |
| Protein Properties |
Length: 425aa MW: 44992.5 Da PI: 10.484 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PEQU_06996 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 110.4 | 2.7e-34 | 129 | 208 | 1 | 66 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..............s 66
a+g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+ +akpai+ l+++
PEQU_06996 129 ATGRKDRHSKVCTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLMINAKPAIDRLAQLppwrppspsppppaA 208
589**************************************************************988776643332220 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 425 aa
Download sequence Send
to blast |
MAKLFQSATT GIKRSKKKEK KPCSFRSGKH GKRKSSRAGR EGGGGRGGGV GGGAPGSKED 60
SDSAPPEPKR RRTRKRASPN PAASILPLPF LLFRLCLLIG EAAGRHEDRR PGGGGDIVEV 120
QGGGHIVRAT GRKDRHSKVC TAKGLRDRRV RLSAHTAIQF YDVQDRLGYD RPSKAVDWLM 180
INAKPAIDRL AQLPPWRPPS PSPPPPAAAE KPLLSSETAD YASAYGFCSS SSLLPPSLDS 240
DSIADTIKSF FPMTAAASSS YHPAIGGSSS HIEDLSLSLQ SVQDPIFNHQ HNRSAPTHQP 300
IFACAAPLAF DAGSSAWPEP SHRAASWNLV QNQFLTQWGT LQSSNPPSIR AMVDPIALSS 360
ASGHQMQLAA FRPSSNSPAP AFRTAAGEAV GFSGYHVPAR LQGGEEEHGS GVPDAPPSAS 420
SASHH
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| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 12 | 20 | KRSKKKEKK |
| 2 | 19 | 33 | KKPCSFRSGKHGKRK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Plays a pivotal role in the control of morphogenesis of shoot organs by negatively regulating the expression of boundary-specific genes such as CUC genes, probably through the induction of miRNA (e.g. miR164). Participates in ovule develpment (PubMed:25378179). {ECO:0000269|PubMed:17307931, ECO:0000269|PubMed:25378179}. |
| Publications
? help Back to Top |
- Alvarez JP,Furumizu C,Efroni I,Eshed Y,Bowman JL
Active suppression of a leaf meristem orchestrates determinate leaf growth.
Elife, 2017.
[PMID:27710768] - Koyama T,Sato F,Ohme-Takagi M
Roles of miR319 and TCP Transcription Factors in Leaf Development.
Plant Physiol., 2017. 175(2): p. 874-885
[PMID:28842549] - Bresso EG,Chorostecki U,Rodriguez RE,Palatnik JF,Schommer C
Spatial Control of Gene Expression by miR319-Regulated TCP Transcription Factors in Leaf Development.
Plant Physiol., 2018. 176(2): p. 1694-1708
[PMID:29133375] - Mazur MJ, et al.
Arabidopsis TCP Transcription Factors Interact with the SUMO Conjugating Machinery in Nuclear Foci.
Front Plant Sci, 2017. 8: p. 2043
[PMID:29250092]
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