 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PEQU_06849 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
|
| Family |
NAC |
| Protein Properties |
Length: 331aa MW: 38156.2 Da PI: 7.1521 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PEQU_06849 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 169.2 | 1.3e-52 | 14 | 143 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96
+ppGfrFhPtdeel+ +yLkkkv+ +k++l evi+evd++k+ePwdL++ ++ a ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + + +
PEQU_06849 14 VPPGFRFHPTDEELLLYYLKKKVSFEKFDL-EVIREVDLNKTEPWDLQErcRIGAtPQNEWYFFSHKDRKYPTGSRTNRATSAGFWKATGRDKCIRT-T 110
69****************************.99**************963433332556*************************************9.8 PP
NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129
+++g++ktLvfy+grap+g ktdW+mheyrle
PEQU_06849 111 CNKIGMRKTLVFYRGRAPHGLKTDWIMHEYRLE 143
889****************************85 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009834 | Biological Process | plant-type secondary cell wall biogenesis |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0048829 | Biological Process | root cap development |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 331 aa
Download sequence Send
to blast |
MASSSSATTS SYGVPPGFRF HPTDEELLLY YLKKKVSFEK FDLEVIREVD LNKTEPWDLQ 60
ERCRIGATPQ NEWYFFSHKD RKYPTGSRTN RATSAGFWKA TGRDKCIRTT CNKIGMRKTL 120
VFYRGRAPHG LKTDWIMHEY RLEDTDDPQA DGTEDGWVVC RVFKKKCFLK ISGDPNSTKC 180
ADGMTNPAAQ YLNQQQSFHL HHQPYSFALH YPPAVTYHYP QVQVHDLLSN HRPVTGYHDF 240
SVLPNECEPL QEVGEGRVHQ PANEWVLMES LDERFAGAGX XXXXXXXXXX XXXXXXXXXX 300
XXXXXXXXXX XXXXGWPAPA SELEVLRECS R
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-52 | 1 | 166 | 4 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-52 | 1 | 166 | 4 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-52 | 1 | 166 | 4 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-52 | 1 | 166 | 4 | 166 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 2e-52 | 1 | 166 | 4 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 2e-52 | 1 | 166 | 4 | 166 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator. Together with BRN1 and SMB, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis. {ECO:0000269|PubMed:20197506}. |
