PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_06801
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 150aa    MW: 17202.7 Da    PI: 9.9498
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_06801genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-18555256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                 y+GVr++  +g+WvAeIr p +   r r +lg++++ae Aa a+++a+ kl+ge
  PEQU_06801  5 IYRGVRQRN-WGKWVAEIRLPQN---RMRLWLGTYDSAEAAAYAYDRAAYKLRGE 55
                59****998.**********954...59*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.03E-14464No hitNo description
PfamPF008479.5E-13555IPR001471AP2/ERF domain
SMARTSM003802.7E-33568IPR001471AP2/ERF domain
PROSITE profilePS5103223.13562IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-30563IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-23563IPR016177DNA-binding domain
PRINTSPR003673.4E-13617IPR001471AP2/ERF domain
PRINTSPR003673.4E-134464IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MKKKIYRGVR QRNWGKWVAE IRLPQNRMRL WLGTYDSAEA AAYAYDRAAY KLRGEYARLN  60
FPELRDAGAE CSDKLRELRL AVDSKIQAVC QRLAKQRKKR RGEGEKKGED RKGEQSLMVG  120
EGGGEMDGGE CSLARFPSFD VDLIWEVLAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-19262263ATERF1
3gcc_A1e-19262263ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020584547.11e-108ethylene-responsive transcription factor ERF061-like
SwissprotQ9LM152e-39RA213_ARATH; Ethylene-responsive transcription factor RAP2-13
TrEMBLA0A2I0W6Y13e-73A0A2I0W6Y1_9ASPA; Ethylene-responsive transcription factor ERF061
STRINGXP_008791428.14e-54(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP88282842
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.12e-33ERF family protein
Publications ? help Back to Top
  1. Ikeuchi M, et al.
    PRC2 represses dedifferentiation of mature somatic cells in Arabidopsis.
    Nat Plants, 2015. 1: p. 15089
    [PMID:27250255]
  2. Rudnik R,Bulcha JT,Reifschneider E,Ellersiek U,Baier M
    Specificity versus redundancy in the RAP2.4 transcription factor family of Arabidopsis thaliana: transcriptional regulation of genes for chloroplast peroxidases.
    BMC Plant Biol., 2017. 17(1): p. 144
    [PMID:28835225]