PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_05185
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 426aa    MW: 47202.9 Da    PI: 8.1163
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_05185genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.4e-105296254
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                r +h++ E+rRR     +f+ LrellP++    ++K +Ka+ L +++eYI+ L
  PEQU_05185 52 RSKHSATEQRRRT----RFQILRELLPNS----DQKRDKASFLLEVIEYIRFL 96
                889********95....6**********9....9*****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.4994696IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.8E-1549116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.89E-1351123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-75296IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.35E-1152101No hitNo description
SMARTSM003531.7E-556102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MDSLRLNICA WGKTENRNSP LPGGDGNQTS RTRGLTLKID GRSINQKVST PRSKHSATEQ  60
RRRTRFQILR ELLPNSDQKR DKASFLLEVI EYIRFLHEKV QKFQSLYPGW SDENTKFMTW  120
VFNFGVYFFS GQSSASDVFL IGLYQKAKRC FACNSFEVVT FSQGLIGAPA IVRSRGDIYP  180
RFPFSNNLSF FSALNNNHQD SGDNLGAAPI IKNGFAPGFV LSDNGIPGSL NPIESELITS  240
VSYKNLETHS DFTNKVVASL SSLQPSLYPV GREPGLVHTD QTLITEADNL ASQSQWMRPS  300
SPGDCAISND ILNEHEELRV DEGTISVSCA YSQGLLNNIS EALQNSGIDL SQASISVQIN  360
LGRKAGARIP KPSLPDEPSC PSLSRVQWDL DASKDSSSAT VNAADLRSYY EETKLRLMRS  420
KLSQLR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020590669.11e-123transcription factor BIM2-like isoform X1
RefseqXP_020590670.11e-123transcription factor BIM2-like isoform X1
TrEMBLA0A2H9ZSR55e-91A0A2H9ZSR5_9ASPA; Transcription factor BIM2
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76237128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08130.17e-30bHLH family protein