PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_04606
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ARR-B
Protein Properties Length: 722aa    MW: 80525.4 Da    PI: 7.2664
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_04606genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like81.11.2e-25215270155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ..kYRl 55 
                 kpr++W+ eLH++Fv av+qL G +kA+Pk+il++m+v+ Lt+e+v+SHLQ  kYRl
  PEQU_04606 215 KPRVVWSVELHRKFVAAVNQL-GVDKAVPKRILDIMNVDKLTRENVASHLQacKYRL 270
                 79*******************.*****************************888998 PP
2Response_reg76.78.3e-26261341109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl vdD+p+ +++l+++l + +y +v+++ ++ +al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+ge + + + +  Ga 
    PEQU_04606  26 VLAVDDDPICLKVLETLLIRCQY-NVTTTNQAIKALNMLRENKakFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGETKAVMKGIAHGAC 120
                   799********************.***************998889*******************87754.558************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l Kp+ +eel +
    PEQU_04606 121 DYLLKPVRIEELKN 134
                   ***********987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0363921.4E-1641678IPR017053Response regulator B-type, plant
SuperFamilySSF521728.4E-3523144IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.5E-4123178No hitNo description
SMARTSM004483.5E-3124136IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011042.93125140IPR001789Signal transduction response regulator, receiver domain
PfamPF000724.4E-2326134IPR001789Signal transduction response regulator, receiver domain
CDDcd001565.85E-2727139No hitNo description
SuperFamilySSF466891.97E-16212274IPR009057Homeodomain-like
PROSITE profilePS5129410.201212271IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.8E-27213275IPR009057Homeodomain-like
TIGRFAMsTIGR015572.0E-22215269IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 722 aa     Download sequence    Send to blast
MSVEEKIGII GGDEVPGEKF PIGMRVLAVD DDPICLKVLE TLLIRCQYNV TTTNQAIKAL  60
NMLRENKAKF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSANGETKA VMKGIAHGAC  120
DYLLKPVRIE ELKNIWQHVV RRKNFDQIER SGLNIGKDYE KVQAANSEVM KGFDANRPMD  180
SNTKFNKKRK DSNVEDEDDY EEGTHETEDP SCHKKPRVVW SVELHRKFVA AVNQLGVDKA  240
VPKRILDIMN VDKLTRENVA SHLQACKYRL YLKRLSAVTT QQANMASSLG GRDMSFVHMG  300
SFNNFGTSQA LTTFQPIGVS NRTDPNLLGP PRVALGMVQL GRTQNNTNNP VNDISKFQNI  360
SVPINQCENL FEGIPRSLEL DRLQQQPKRI NESNNRLQGA FSDASNSNFI SSTNNSLLLQ  420
GNQSPVSIPS CVANRHEMSP VISARFLDLG KRNESWQNAP SLNTYSGDSL LAGTPYSNDS  480
LTSSNTRATL ASTVLQIPGN PSNISSDNLV VPVQRSLVGQ DVQCQTSSGI TDPKFLSFKS  540
VEQKSNDSKQ RCTVETNIAF SSSSNATFTN QTLLNNVAES QGLKNQSLNK KFDFNLMNQP  600
SFDTAFNTQY GKTDKSNFYN GLTFSEDNLF GVSKMQGGFG SNGCNFDDLM NEMIKSVRSY  660
FSFAQLFINN LIIIFSFCVD LLIILLGEFT YVAQFLCIFL SHLNFYIYIH MHGKVSFTFK  720
KC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A1e-23211276164ARR10-B
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020578705.10.0two-component response regulator ORR22-like
TrEMBLA0A2I0WTS90.0A0A2I0WTS9_9ASPA; Two-component response regulator ARR12
STRINGXP_008794326.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18563894
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-114response regulator 12