PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_04477
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 256aa    MW: 28027.4 Da    PI: 7.5706
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_04477genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.83.1e-11136183455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka++L + ++YI+ Lq
  PEQU_04477 136 SHSLAERARREKISERMKILQDLVPGC----NKVIGKASVLDEIINYIQALQ 183
                 8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.03E-10130187No hitNo description
SuperFamilySSF474593.93E-18130200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.221132182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-18132201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-8136183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-11138188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048446Biological Processpetal morphogenesis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MPEMWQFPMV GVPSAVRVPA AGIGYRDVSA GESTVTEHSP GNRCKKKRRD AGPTAASIAL  60
SEEDSSKFVS TSSGGIDLAD SQTRKRSKTG KSIDENAESK VDAEASSDGN KFDQPLEPPK  120
PEYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAS VLDEIINYIQ  180
ALQRQVEFLS MKLEAVDSRI NTGLEGFPSK DFGGQAYENI TSLAYTPQRT RDYVQQGSAA  240
EWLHMQVGGA LERVTN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14448KKKRR
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that may regulate jasmonate-regulated genes. {ECO:0000250|UniProtKB:Q69WS3}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00207DAPTransfer from AT1G59640Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020578609.10.0transcription factor bHLH79 isoform X2
SwissprotQ84T084e-80BH089_ORYSJ; Transcription factor BHLH089
TrEMBLA0A2I0X3J71e-153A0A2I0X3J7_9ASPA; Transcription factor BPE
STRINGXP_008808720.12e-96(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP30653577
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.16e-73BIG PETAL P
Publications ? help Back to Top
  1. Yilmaz A, et al.
    GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Plant Physiol., 2009. 149(1): p. 171-80
    [PMID:18987217]