PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_03067
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB_related
Protein Properties Length: 553aa    MW: 61990.5 Da    PI: 5.154
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_03067genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.49e-10441489348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                       WT  E  +lvd+v q+G g+W+ I r +      Rt+ ++k++w+++l
       PEQU_03067 441 QWTLSEVVRLVDGVSQHGVGRWTEIKRLFFstsAYRTAVDLKDKWRNLL 489
                      6********************************99************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.6E-12433492IPR009057Homeodomain-like
PROSITE profilePS5129415.187434493IPR017930Myb domain
SuperFamilySSF466891.22E-15435501IPR009057Homeodomain-like
SMARTSM007171.2E-8438491IPR001005SANT/Myb domain
CDDcd116602.55E-19440490No hitNo description
PfamPF002497.2E-7441489IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 553 aa     Download sequence    Send to blast
MLEVDVADSK DSSLESLLED NWVNPIKEVN HLLCNLIQTE QGDISVAIPN EEAIEVDCLL  60
EEPHAEALDV DAMYLNSETL ENCLNVEGTP CSTGLYDQRD DCGILDVDAE KAGMQALKYE  120
FMFQGSEENE NLHISCNLSC DCSDYLLENS LDHQSNSEAT FGNMEYAGQI QCMDSGVDEV  180
EPDYISKTFT VASLIQTTAP DSTKVRSQDA LHTAFCRNTP LEAQKWRNHE LLFDEQKLTA  240
LDNVSDLMES AFLYSENEDE MILVPQNGMT ASSFVSMPHS GALVSGPAKN ELPYEDGQAA  300
VSQGAHKVSG STNVSVISSK RLRKPTRRYI EETSEIKPRC SYDRFKMSII CSEEKLIYAR  360
TERKNCWSGA VQLLYHDYPG RAHSLRGCRR NSSKKLENDR KGYISPSESA KFSCVQVSEK  420
PYDGSDKAPA RINKPRKHNR QWTLSEVVRL VDGVSQHGVG RWTEIKRLFF STSAYRTAVD  480
LKDKWRNLLR ASVAGPTNRN LVESQKKQAS AAVPQSILQR VRDLSIIYPY PRSRKPRITA  540
LPNIIPPGSV SKY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020600264.10.0uncharacterized protein LOC110039515 isoform X1
RefseqXP_020600265.10.0uncharacterized protein LOC110039515 isoform X1
RefseqXP_020600266.10.0uncharacterized protein LOC110039515 isoform X1
TrEMBLA0A2I0WPS00.0A0A2I0WPS0_9ASPA; Telomere repeat-binding protein 4
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69663341
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.11e-26TRF-like 6