PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_00378
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 176aa    MW: 20275.3 Da    PI: 9.7291
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_00378genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.51.2e-091188289
        FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89
                 Y++YA+++GFsvrk++++  +++++i+++ +vC k g+++e k + +  + +r        a+ ++  e +++w v+kl + Hn +l
  PEQU_00378 11 VYCTYAHHIGFSVRKDHTTFWTNSRNIKTKYLVCGKAGFKKELKIT-TIVKYRR--------AETRIVDE-EDNWIVKKLIESHNLSL 88
                7****************************************98877.3333333........33444444.68899999999999666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.7E-71188IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MVHNEKEAYE VYCTYAHHIG FSVRKDHTTF WTNSRNIKTK YLVCGKAGFK KELKITTIVK  60
YRRAETRIVD EEDNWIVKKL IESHNLSLAN PGDKHLLSYI KKISEVNANV LRSMTQSGIK  120
PKEAFNFLAQ EVGGVENLKC TKTDAFNFIQ REKRCRVENG DVNALLQLFA EGRAHV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020592536.11e-100protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A2I0VS865e-53A0A2I0VS86_9ASPA; Protein FAR1-RELATED SEQUENCE 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-12FAR1-related sequence 5