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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_00084 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | ERF | ||||||||
Protein Properties | Length: 278aa MW: 30891 Da PI: 6.9414 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.9 | 8.1e-16 | 118 | 161 | 2 | 49 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaa 49 + +GVr+++ +g+W+AeIrdp +r r +lg++ +aeeAaka+ +a PEQU_00084 118 HLRGVRQRR-WGKWAAEIRDP----IRrVRKWLGTYNSAEEAAKAYREA 161 679***998.**********7....246******************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 3.3E-10 | 117 | 161 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.624 | 118 | 175 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.9E-20 | 118 | 179 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.29E-15 | 118 | 165 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.2E-20 | 119 | 169 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.0E-8 | 119 | 130 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.01E-21 | 120 | 165 | No hit | No description |
PRINTS | PR00367 | 3.0E-8 | 141 | 157 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence Send to blast |
MPEPQRQLLS LNTIRGKKNK ESSIVALQKF ETKPIRTIRV LLNDPDATDS SGGDDDDDIF 60 PDHHLKKRTV HEISLLPIRL NPISSSSSAS IPVCNPETRK KPKPLKLRRL TPSTSSPHLR 120 GVRQRRWGKW AAEIRDPIRR VRKWLGTYNS AEEAAKAYRE AFTRIQAEKL GLKLSSTTPP 180 CSSSSSYISE RTLSLASPSS VLDVSVQQTL ATAKPSELLP APQVDRFEDM ELTDLDLCFT 240 GADSDEFLVG NLGDDFVGLD DLPLWAPQFD GGDLAFLD |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00217 | DAP | Transfer from AT1G68550 | Download |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020592028.1 | 0.0 | ethylene-responsive transcription factor ERF118-like | ||||
TrEMBL | A0A2I0WWJ9 | 1e-107 | A0A2I0WWJ9_9ASPA; Ethylene-responsive transcription factor ERF118 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5020 | 37 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23750.2 | 7e-18 | cytokinin response factor 2 |