PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s985981g001

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

BES1

Protein Properties

Length: 338aa MW: 35870.8 Da PI: 8.7712

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s985981g001	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	207	5.4e-64	3	147	2	149
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeae..aagssasaspe 91 +++r ptw+ErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++ a+g s s sp+ PDK_30s985981g001 3 SGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVERMDvvAVGGSVSPSPC 94 689**********************************************************************7776226799*** PP DUF822 92 sslqsslkssalaspvesysaspksssfpspssldsislasa...asllpvlsvlslvsss 149 +s+q +sp++sy++sp+sssfpspss+ +++ + +sl+p+l++ls++sss PDK_30s985981g001 95 TSYQ--------PSPRASYNPSPASSSFPSPSSSYITNAYKGtdgNSLIPWLKNLSSASSS 147 ........****************9877766554677********997766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	3.4E-65	3	142	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence Send to blast
MPSGTRLPTW RERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG 60 WTVEEDGTTY RKGCKPVERM DVVAVGGSVS PSPCTSYQPS PRASYNPSPA SSSFPSPSSS 120 YITNAYKGTD GNSLIPWLKN LSSASSSTSS SKLPNPHHLF IHGGSISAPV TPPLSSPTAR 180 SPRIKTDWDD SAAQPPWAGA QYTFLPSSTP PSPGRQVLPD PAWLAGLRLP SGGPSSPTYS 240 LVSSNPFGFF KEASAGAGSS RMLTPGQSGT CSPVPGGGHA DVQMSDGISD EFAFGSSSNG 300 DLPANGLVKP WEGERIHEEC ASDELELTLG SSRTRSGA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	1e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	1e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	1e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	1e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00248	DAP	Transfer from AT1G78700	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008796066.1	0.0	protein BZR1 homolog 3
Swissprot	Q5Z9E5	1e-141	BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBL	A0A2H3YAV7	0.0	A0A2H3YAV7_PHODC; protein BZR1 homolog 3
STRING	XP_008796066.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-100	BES1/BZR1 homolog 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]