PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s976561g001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | bZIP | ||||||||
Protein Properties | Length: 774aa MW: 84108 Da PI: 8.6874 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 67 | 3.1e-21 | 684 | 746 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+el+r++rkq+NRe+ArrsR+RK+ae eeL++++++L+aeN +Lk+ele+l+ + kl+se+ PDK_30s976561g001 684 ERELRRQKRKQSNRESARRSRLRKQAEFEELANRAETLKAENNSLKEELEHLQGDCGKLTSEN 746 89**********************************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50939 | 42.716 | 16 | 211 | IPR006593 | Cytochrome b561/ferric reductase transmembrane |
CDD | cd08766 | 8.09E-62 | 43 | 183 | No hit | No description |
SMART | SM00665 | 1.4E-44 | 52 | 178 | IPR006593 | Cytochrome b561/ferric reductase transmembrane |
Pfam | PF03188 | 3.7E-39 | 52 | 181 | IPR006593 | Cytochrome b561/ferric reductase transmembrane |
Pfam | PF07777 | 4.2E-30 | 286 | 385 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 9.7E-29 | 517 | 645 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.2E-17 | 678 | 743 | No hit | No description |
Pfam | PF00170 | 5.1E-19 | 684 | 746 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 8.1E-21 | 684 | 748 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.633 | 686 | 749 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.19E-11 | 687 | 743 | No hit | No description |
CDD | cd14702 | 1.95E-21 | 689 | 733 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 691 | 706 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 774 aa Download sequence Send to blast |
MARPEFLVAA SRAGMAAHVL ALTAAILVLV WVLHFGGGAH LHSENKKLIF NVHPLVMTLG 60 FILVIGEGIM AYKTVRAVRP VQKCVHLLLH LVALTLGIFG VYVAFKYHRE SLIPDMYTLH 120 SWLGMCTICL FGLQWLFGFL FFWYPQASLR TREMVVPIHV SAGLAIFFMT ICTAETGFVQ 180 RGTEPGPETR LINFTGLIIL LFGLAGIQGL GESNNPIIGS LNKDMGYIGQ TRSPIDQSIK 240 YNESSIGRCI FRDIIEVIYM LRLPFSDQVI NISRKLEEVQ RHVFLMGNGE MTTPTETQMS 300 TSTQGQPPSS PAMVYPDWAS FQAYYNSAGT SPIPPPGFLH SPLALSPQGH PYLWGPQQML 360 PPYGTPPPYV AMYPHGGLYP HPSIPMGSYP YSPFATPSAN GTAEASLNFQ RSVTEVFLFI 420 ITHPGKLQKL SNSNHMSLKG LNIKDALIAS LRPFPYLVTL IHLHNQPDII HKSEIGNLSN 480 KIAVHLLVVK ANVSQPRQVA GASGAETDGK LHQGKQRSAL KKSRGSIGSL DMLTGKVNDT 540 RNASGASANG AFSQSDESGS EVSSEGSDAD FQNGSQQRHG SEHGSGNDGA NKASSARTTS 600 NEVTQTLPTP IVLNPTVPFV AIPPGGLAGP ATTLNIGMDY SGGPAPISAV RGKVPAAPST 660 APLIPSSHEG SRDRVPPDPS IRDERELRRQ KRKQSNRESA RRSRLRKQAE FEELANRAET 720 LKAENNSLKE ELEHLQGDCG KLTSENATLA EKLKKHFSEE SRADEQVDPV NGDG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4o6y_A | 4e-47 | 15 | 203 | 13 | 210 | Probable transmembrane ascorbate ferrireductase 2 |
4o6y_B | 4e-47 | 15 | 203 | 13 | 210 | Probable transmembrane ascorbate ferrireductase 2 |
4o79_A | 4e-47 | 15 | 203 | 13 | 210 | Probable transmembrane ascorbate ferrireductase 2 |
4o79_B | 4e-47 | 15 | 203 | 13 | 210 | Probable transmembrane ascorbate ferrireductase 2 |
4o7g_A | 4e-47 | 15 | 203 | 13 | 210 | Probable transmembrane ascorbate ferrireductase 2 |
4o7g_B | 4e-47 | 15 | 203 | 13 | 210 | Probable transmembrane ascorbate ferrireductase 2 |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 700 | 706 | RRSRLRK |
2 | 700 | 707 | RRSRLRKQ |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | JX110168 | 1e-155 | JX110168.1 Phoenix dactylifera clone BAC GTDN3BL02_S34, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008787908.1 | 1e-180 | bZIP transcription factor 16-like | ||||
Refseq | XP_026659971.1 | 1e-180 | bZIP transcription factor 16-like | ||||
TrEMBL | A0A2H3XSE6 | 1e-178 | A0A2H3XSE6_PHODC; bZIP transcription factor 16-like | ||||
STRING | XP_008787906.1 | 1e-179 | (Phoenix dactylifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 2e-42 | basic region/leucine zipper transcription factor 16 |