PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s976561g001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bZIP
Protein Properties Length: 774aa    MW: 84108 Da    PI: 8.6874
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s976561g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1673.1e-21684746163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e+el+r++rkq+NRe+ArrsR+RK+ae eeL++++++L+aeN +Lk+ele+l+  + kl+se+
  PDK_30s976561g001 684 ERELRRQKRKQSNRESARRSRLRKQAEFEELANRAETLKAENNSLKEELEHLQGDCGKLTSEN 746
                        89**********************************************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5093942.71616211IPR006593Cytochrome b561/ferric reductase transmembrane
CDDcd087668.09E-6243183No hitNo description
SMARTSM006651.4E-4452178IPR006593Cytochrome b561/ferric reductase transmembrane
PfamPF031883.7E-3952181IPR006593Cytochrome b561/ferric reductase transmembrane
PfamPF077774.2E-30286385IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165969.7E-29517645No hitNo description
Gene3DG3DSA:1.20.5.1704.2E-17678743No hitNo description
PfamPF001705.1E-19684746IPR004827Basic-leucine zipper domain
SMARTSM003388.1E-21684748IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.633686749IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.19E-11687743No hitNo description
CDDcd147021.95E-21689733No hitNo description
PROSITE patternPS000360691706IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 774 aa     Download sequence    Send to blast
MARPEFLVAA SRAGMAAHVL ALTAAILVLV WVLHFGGGAH LHSENKKLIF NVHPLVMTLG  60
FILVIGEGIM AYKTVRAVRP VQKCVHLLLH LVALTLGIFG VYVAFKYHRE SLIPDMYTLH  120
SWLGMCTICL FGLQWLFGFL FFWYPQASLR TREMVVPIHV SAGLAIFFMT ICTAETGFVQ  180
RGTEPGPETR LINFTGLIIL LFGLAGIQGL GESNNPIIGS LNKDMGYIGQ TRSPIDQSIK  240
YNESSIGRCI FRDIIEVIYM LRLPFSDQVI NISRKLEEVQ RHVFLMGNGE MTTPTETQMS  300
TSTQGQPPSS PAMVYPDWAS FQAYYNSAGT SPIPPPGFLH SPLALSPQGH PYLWGPQQML  360
PPYGTPPPYV AMYPHGGLYP HPSIPMGSYP YSPFATPSAN GTAEASLNFQ RSVTEVFLFI  420
ITHPGKLQKL SNSNHMSLKG LNIKDALIAS LRPFPYLVTL IHLHNQPDII HKSEIGNLSN  480
KIAVHLLVVK ANVSQPRQVA GASGAETDGK LHQGKQRSAL KKSRGSIGSL DMLTGKVNDT  540
RNASGASANG AFSQSDESGS EVSSEGSDAD FQNGSQQRHG SEHGSGNDGA NKASSARTTS  600
NEVTQTLPTP IVLNPTVPFV AIPPGGLAGP ATTLNIGMDY SGGPAPISAV RGKVPAAPST  660
APLIPSSHEG SRDRVPPDPS IRDERELRRQ KRKQSNRESA RRSRLRKQAE FEELANRAET  720
LKAENNSLKE ELEHLQGDCG KLTSENATLA EKLKKHFSEE SRADEQVDPV NGDG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4o6y_A4e-471520313210Probable transmembrane ascorbate ferrireductase 2
4o6y_B4e-471520313210Probable transmembrane ascorbate ferrireductase 2
4o79_A4e-471520313210Probable transmembrane ascorbate ferrireductase 2
4o79_B4e-471520313210Probable transmembrane ascorbate ferrireductase 2
4o7g_A4e-471520313210Probable transmembrane ascorbate ferrireductase 2
4o7g_B4e-471520313210Probable transmembrane ascorbate ferrireductase 2
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1700706RRSRLRK
2700707RRSRLRKQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX1101681e-155JX110168.1 Phoenix dactylifera clone BAC GTDN3BL02_S34, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008787908.11e-180bZIP transcription factor 16-like
RefseqXP_026659971.11e-180bZIP transcription factor 16-like
TrEMBLA0A2H3XSE61e-178A0A2H3XSE6_PHODC; bZIP transcription factor 16-like
STRINGXP_008787906.11e-179(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.12e-42basic region/leucine zipper transcription factor 16