PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s976271g003

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

Dof

Protein Properties

Length: 286aa MW: 30551 Da PI: 7.7495

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s976271g003	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	128.9	1.4e-40	27	88	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +++alkcprCdstntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss PDK_30s976271g003 27 PDQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKGCRRYWTQGGSLRNVPVGGGCRKNKRSSS 88 6899******************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-28	25	85	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	4.9E-34	28	85	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.562	31	85	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	33	69	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005730	Cellular Component	nucleolus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence Send to blast
MASHPLEEVL VCSKPQQPGE RKQRPHPDQA LKCPRCDSTN TKFCYYNNYS LSQPRYFCKG 60 CRRYWTQGGS LRNVPVGGGC RKNKRSSSSS SSSSSSSKRL IADQDPTSNS NPLLPGLIPP 120 PLSYDPSDLT LAFAGLHKPP TPKQLGLEDH DTFLLGNPNP NPNPSTSSIP TAPASGFLDI 180 LRSGFADTTS PNGFHNLYYG FGGNGNVEGG VSGEEMLLPF EGGFGGAPTT TSQGSCKAMD 240 GGENKVLMGL QWPLSGDHGN LVMDSGRDIW NGVGSSWHGL INSSLM

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008783672.1	0.0	dof zinc finger protein DOF2.1
TrEMBL	A0A2H3XHE3	0.0	A0A2H3XHE3_PHODC; dof zinc finger protein DOF2.1
STRING	XP_008783672.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4704	32	63

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	6e-38	Dof family protein