PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s975231g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family WRKY
Protein Properties Length: 577aa    MW: 61900.9 Da    PI: 6.2849
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s975231g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.86e-25330384259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv    +r+aed +v+++tYeg+Hnh+
  PDK_30s975231g001 330 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPV----QRCAEDRSVLITTYEGKHNHP 384
                        7***************************99**95....67999***************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-27314386IPR003657WRKY domain
SuperFamilySSF1182903.92E-23322386IPR003657WRKY domain
PROSITE profilePS5081124.811324386IPR003657WRKY domain
SMARTSM007742.6E-30329385IPR003657WRKY domain
PfamPF031064.9E-21331384IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    Send to blast
MEKGGGGLSL GTSSDLAGFK TGGAMDSFLG GGGLKQKSGS RESEDHFPMS LRCHDEPAEG  60
EEKRRVVCEM DFFSDELRKE RAPPDPDPDV PDISIKKEDL TINMGLHLHT TNTGSDQSTV  120
VNGLSLNEDK ESKNDLAAVQ AELRRMNQEN QRLKSMLSHA TNNFNSLQMH FIALMQERNQ  180
RNGSLQWHEA MHEKMGDKRN EHEDAIVPRR FLNLGLAPLA DEASHSPTEG GSQDRSISPP  240
NNVEVMSMDY NVEENYNSKE AVPIDGERSD GRDVRVTFRE ESPGKVSQSW IPNKAANSSP  300
SKSSDQQSQE ATIRKARVSV RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR AYYRCTMAAG  360
CPVQRCAEDR SVLITTYEGK HNHPLPPAAM ATASTTSAAA NMLLSGSMSS TDGLMNSSFL  420
AKTELPCSSS VAAISAAAPF PTVTLDLAHT PNVPFRRPST QFQVPFPNGA APVLGATPPT  480
SLLLDFGQTF FNQSKLISGV QMSPGSDGSQ LSHPKVQSVQ PSSLADTVSA ATAAITADPS  540
FTAVLAAAIT SIIGGGGSSR AAQTGNSNNN TSSENKI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-19316388176WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017700189.10.0probable WRKY transcription factor 31
TrEMBLA0A2H3ZUY20.0A0A2H3ZUY2_PHODC; probable WRKY transcription factor 31
STRINGXP_008800737.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP52653656
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.11e-97WRKY family protein